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… processing unit (GPU)-based high-performance computing resources, an upcoming hackathon led by the Oak Ridge … “JGI is one of the largest producers of environmental genomics data and has a strong reputation in the community,” …

Metagenomic datasets could help map out microbial diversity … Lab), have taken stock of the current state of microbial genomic biodiversity. Using publicly available genome … estimated that about 42% of the bacterial diversity has no genomic representation in the public databases. In a similar …

… outcomes.” The annual CSP call is focused on large-scale genomic science projects relevant to the DOE’s Office of … calls including our New Investigator and Functional Genomics calls, here on our website . See below for the full …

… to conduct a similar type of search in microbial and metagenomic databases. In this case, the machine “learned” to … Simon Roux, a JGI research scientist in the  Environmental Genomics group . Training the Search Tool Inoviruses are … and also those associated with humans.” The work also used resources of the  National Energy Research Scientific …

Through the JGI-UC Merced Genomics Internship, graduate students Candace Cole, Mo … Cole, UC Merced JGI Mentors : Ben Cole & Axel Visel, Genomics of Plant-Microbial Interactions “The summer … in STEM. Everyone is so happy to know you and provide all resources to excel in your project.”     Vicente Ramirez, UC …

Laboratory (Berkeley Lab), Woyke has led JGI’s Microbial Genomics Program since 2009 and heads the Single Cells group. She has also served as the Functional Genomics Department Head for the Environmental Genomics and … caliber support the JGI User community in accessing our resources and help them to push the boundaries of energy and …

… and custom software for integrating metabolomics with genomic data (MAGI) for functional annotation and …

… and DNA are close to our JGI hearts, we’re highlighting genomic science research that feels especially relevant to … Kaze was part of the  2018 cohort of the JGI-UC Merced Genomics Internship Program, and is part of  Mark Sistrom’s … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …

… feedstock crops. Summary A plant is like an office building, its roots are akin to the ground floor lobby. … of the key community participants and enabling future metagenomics studies.   … The sequencing project was funded by … the Plant–Microbe Interfaces Scientific Focus Area in the Genomic Science Program, the Office of Biological and …

… awardee.  The CSP Annual call is focused on large-scale genomic science projects relevant to the DOE’s Office of … well as our smaller-scale New Investigator and Functional Genomics calls, here on our website.   See below for the …

A preview of how large-scale single cell genomics complements metagenomics studies. The Science Researchers demonstrated the value of conducting large-scale single cell genomics by collecting nearly 500 single cells from a single …

Dr. Roux joined the JGI in 2017 to lead viral genomics research as part of the Metagenome Program. His … analyzing viral datasets, and the organization of community-building efforts in the field of viral ecogenomics. For this role, Dr. Roux can rely on more than 10 …