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Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities
… proposal calls, projects can request up to 50 polar and 150 nonpolar metabolomics analyses. For the other calls, we … Annotation and Gene Integration . ACS Chem Biol. 2019 Apr 19;14(4):704-714. doi: 10.1021/acschembio.8b01107. Epub 2019 …
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
… resulted from a three-way collaboration that began in 2019, recalled Uri Neri of Tel Aviv University, one of the …
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Designer DNA: JGI Helps Users Blaze New Biosynthetic Pathways
… the JGI DNA Synthesis Science Program, which started in 2012, and what they’ve discovered through their … collaboration has been incredibly productive; more than 10 papers, including two Nature Plants publications, in five … Institute of Aquatic Science and Technology in September 2021. Robinson stressed that the DNA Synthesis Science team’s …
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Here, There and Everywhere: Large and Giant Viruses Abound Globally
… giant. The genomes of giant viruses are on the order of 100 times the size of what has typically been associated … viruses, while the genomes of large viruses may be only 10 times larger. And yet, while they are found everywhere, … and characterize uncultivated viruses. For instance, a 2018 study from a JGI-led team uncovered giant viruses in the …
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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
… relative of SOD is P. infestans , responsible for the mid-19th century Irish potato famine.   Shortly before the … origins and mechanisms of pathogenesis . Science. 2006 Sep 1;313(5791):1261-6. doi: 10.1126/science.1128796 Science News …
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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
… are.” But according to a new study published September 16, 2021 in Nature Communications , warmer waters and communities … an average surface temperature of about 58° Fahrenheit (14° Celsius) — a cool intermediate to the ocean’s extremes …
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Picking Up Threads of Cotton Genomics
… out of the green pods in every direction. There are 100 million families around the world whose livelihoods … these things take not five or eight years, but sometimes 10 or 15 years, because the technology develops over time.” …
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Giant Bacteria Found in Guadeloupe Mangroves Challenge Traditional Concepts
Antilles and a co-first author on the study, performed the 16S rRNA gene sequencing to identify and classify the … space that they occupy on a global scale, it’s less than 1% of the coastal area worldwide. But when you then look at carbon storage, you’ll find that they contribute 10-15% of the carbon stored in coastal sediments,” said …
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Massie S. Ballon
Equity & Accountability (IDEA) Chairs Council.   … 2020-2021, UC Women’s Initiative (North Cohort) UC Managing Implicit …
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A Collaboration to Improve Plant Genome Annotations Across Species
Gene Atlas in  Nucleic Acids Research . The project spans 15 years and involves more than 17 research groups. The team set out to characterize the … targets for plant improvement. Surprisingly, about 16 to 56 percent of plant genes are poorly characterized, …
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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
… switchgrass ( Panicum virgatum ), which has established 10 experimental gardens located in eight states spread across 1,100 miles. Switchgrass is a perennial grass that quickly …
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Doubling Down on Known Protein Families
… how big the room is.  A new study  published online Oct. 11, 2023 in  Nature highlights the vast array of functional … Center  Alexander Fleming. “This was a massive analysis of 1.3 billion proteins with massively parallel computations.”  …
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