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Assembly of Robust Bacterial Microcompartment Shells Using Building Blocks from an Organelle of Unknown Function
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Next generation sequencing data of a defined microbial mock community
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… These analyses provide granular insight into microbial functions, traits and competition, illuminating the inner … a  Minimum Information for any Stable Isotope Probing Sequence (MISIP) . They differentiate between required … easier to compare?” said Malmstrom, who worked with JGI Metagenome Program head Emiley Eloe-Fadrosh to host …
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Scaling metagenome sequence assembly with probabilistic de Bruijn graphs
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Approved Proposals
… Click the cards below to view a downloadable pdf of accepted proposals from previous fiscal years for our Community Science Program (CSP) as well as the Facilities …
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Protocols
… Find protocols provided by JGI and the JGI user community below for DNA preparation tools, high …
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JGI Announces FY26 Large Scale Portfolio for Our Community Science Program
… Hugh Cross; [Below] Zac Freedman, Martin Jonikas, Lotus Lofgren, Fumito Maruyama, Lauren Stadler, Tingting Xiang and … the research consortium aims to generate over a terabase of sequence. “We are thrilled to support this year’s CSP … efforts including systems-based approaches to unravel functional capabilities of plants, microbes and microbial …
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A pipeline for targeted metagenomics of environmental bacteria
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Mining Metagenomes for Cas Proteins
… Institute.  The Science Researchers report the discovery of miniature Clustered Regularly Interspaced Short … Institute (JGI), a DOE Office of Science User Facility. The sequences were then biochemically characterized by a team … to foreign genetic elements by incorporating short sequences from infecting viruses and phages. In the event of …
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Differences in crop bacterial community structure between hoatzins from different geographical locations
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Substrate perturbation alters the glycoside hydrolase activities and community composition of switchgrass‐adapted bacterial consortia
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Insight into the Bacterial Endophytic Communities of Peach Cultivars Related to Crown Gall Disease Resistance.
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