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Yasuo Yoshikuni
… of the DNA Synthesis Science Program since 2015. The mission of this program is to harness the power of DNA synthesis, … and applications. This program has supported over 250 projects since it started. At the JGI, Dr. Yoshikuni also manages the Synthetic Biology Pathway Engineering group. His research focus …
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A new view of the tree of life
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New Tricks with Old Bones
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You Can Move, But You Can’t Hide
… develop a tool to quickly and accurately identify mobile genetic elements like plasmids and viruses. The Science Mobile … and spread from cell to cell. Two of the most common forms of MGEs are viruses and plasmids. They can be found … used computational resources from the Exascale Computing Project (17-SC-20-SC), a collaborative effort of the U.S. …
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SPRUCE-ing Up Science
A former JGI intern is now applying his internship lessons on presentations to peatlands Travis Lawrence sits in … brings a bioinformatics expertise, a combination of biology and computer science, to reveal clues about how … . “There was a lot of freedom to explore,” he recalled. His project involved developing an algorithm and although the …
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From Competition to Cooperation
Tracking evolution of symbiotic lifestyles across multiple fungal lineages. … of plant-host and mycorrhizal-fungal interactions. … The project was funded by the U.S. Department of Energy Joint … (CSP # 305), Metatranscriptomics of Forest Soil Ecosystems project (CSP # 570) and the 1000 Fungal Genome projects (CSP …
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JGI Workshops at PAG
The purpose of this Workshop is to illustrate the expansion of this field and bring it to the attention of the wider … developments at the JGI and KBase toward integrative biology and hear from researchers who are applying genomic … of plant systems. We will describe how to apply for a project with the JGI Community Science Program and how you …
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Bacteria and Fungi Divvy Up the Work in Forest Floor
Bacterial enzymes play second fiddle to those from fungi when it comes to breaking … sequences assembled as part of its 1000 Fungal Genomes Project . To map microbial activity, Baldrian’s team … them. Based on data reported in the April issue of Soil Biology and Biochemistry , the team found that fungi are …
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Fungus Fuels Tree Growth
Researchers start pinning down how a fungal symbiont spurs growth of poplar, a potential biofuel feedstock.   … the Laboratory of Excellence Advanced Research on the Biology of Tree and Forest Ecosystems (ARBRE) (ANR-11-LABX … 0002 01 to F. Martin), JGI Community sequencing program project (CSP570, DE-AC02-05CH11231), and National Science …
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A Natural Mechanism Can Turbocharge Viral Evolution
Understanding how a fundamental mechanism of evolution allows microbes to adapt to changing environments. The … (DP150100244) and the Australian Antarctic Science program (project 4031). The work in the Hallam Lab was performed … V.I.R. and S.R.S. acknowledge support for the IsoGenie Project (samples and metadata from Stordalen Mire, Sweden) …
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Nigel Mouncey
… private sector, as well as research expertise in secondary metabolites and synthetic biology. Dr. Mouncey has a long-standing interest in microbial genetics that started with his education and carried forward …
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Giant Bacteria Found in Guadeloupe Mangroves Challenge Traditional Concepts
… 5,000 times bigger than most bacteria. To put it into context, it would be like a human encountering another human … keeps its DNA more organized. “The big surprise of the project was to realize that these genome copies that are … bacterium itself was discovered by Olivier Gros, a marine biology professor at the Université des Antilles in …
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