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Frederik Schulz
… biogeochemical cycles. He provides his expertise to the JGI user community and supports various user projects in the Microbial Program. In an LDRD-funded project, Dr. Schulz established a … University of Vienna (Austria) PhD Microbial Ecology and Bioinformatics, University of Vienna (Austria) … Krinos et al. …
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JGI Early Career Researchers Featured in mSystems Special Issue
Micro-Scale Applications head Rex Malmstrom and Metagenome Program head Emiley Eloe-Fadrosh outline more targeted … microbes. A comprehensive map of viruses including host information, Roux says, would be the foundation upon which … Laboratory (Berkeley Lab). JGI is a DOE Office of Science user facility at Berkeley Lab.   … The U.S. Department of …
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Engagement Webinar: Accessing NEON’s Environmental Sample Archives, Applying JGI & EMSL Omics Tools
Through the  “Facilities Integrating Collaborations for User Science” (FICUS) call between the JGI and the  … or do I need a faculty member as PI? A(nswer: The FICUS program is open to scientists at international institutes.  … Find out more about the FICUS program at:  jgi.doe.gov/user-programs . Q:  How can I get that NEON Biorepository Letter …
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An Integrated Dataset to Understand Ecosystem Interaction
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab). All of this information — 318 metagenomes, 98 plant transcriptomes and … ) is supported by the Genomic Science Program in the U.S. Department of Energy, Office of Science, …
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A One-Stop Shop for Analyzing Algal Genomes
… genomic data on algae into one place, PhycoCosm allows users to easily compile data that answers what genes are … and understand. A team of researchers led by Algal Genomics Program lead Igor Grigoriev and data scientist Alan Kuo at … in the Nucleic Acids Research journal. The genome portal reinforces the JGI’s new strategic focus on exploring algal …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … 2021 Laboratory Directed Research and Development (LDRD) program. Cole also received a DOE  Early Career Research … this spatial transcriptomics data captured molecular information from both plant cells and fungal cells. “Because …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … 2021 Laboratory Directed Research and Development (LDRD) program. Cole also received a DOE  Early Career Research … this spatial transcriptomics data captured molecular information from both plant cells and fungal cells. “Because …
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Data Ecosystem
… for microbiome data science, and the development of new informatics tools specifically optimized for … annotation and analysis. The JGI and KBase seek to enable users to seamlessly access and analyze data on scales …
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JGI@25: Using Team Science to Build Communities Around Data
Genomes (1KFG) Project through a 2012 Community Science Program proposal. Joseph Spatafora of Oregon State … genomes in progress and 200 that are pending samples from users. Roughly 300 have been published. Spatafora said the … Initiative is the product of a 2018 Community Science Program proposal from James Leebens-Mack of the University …
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JGI-Enabled Research Demonstrates the Existence of New Methane-Makers
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … as a principal investigator through the Community Science Program — as well as through the Facilities Integrating … some of the most pressing challenges of our time. For more information, please visit  energy.gov/science/office-science …
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Tracking the Origins of Methane-Producing Microbes
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility, report the discovery of a novel archaeum from … this approach through the Emerging Technologies Opportunity Program (ETOP). Following that work, they partnered once … some of the most pressing challenges of our time. For more information, please visit  energy.gov/science/office-science …
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Integrating Experimentation with Data
… data integration and modeling This three-day joint user meeting will feature insightful presentations, dynamic panel discussions, informative poster sessions, thought-provoking flash talks, … by the DOE's Biological and Environmental Research (BER) program.   … About the Organizers … Stefani Ferreira , …
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