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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
… into a written report that is published in a scientific journal is the ultimate achievement. To get to this point … her summer internship in 2018. She selected one of the projects posted by JGI fungal researchers, Igor Grigoriev … now in her final year of PhD research at UC Merced. She plans to continue expanding her understanding of mathematics …
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JGI@25: Mapping Switchgrass Traits with Common Gardens
… revisited a number of notable achievements that showcase our collaborations and capabilities to enable great science … have also harnessed the switchgrass gardens for other projects. At the 2021 JGI Annual Meeting, David Lowry talked … Just as the common gardens have flourished, so has the community of switchgrass researchers grown. After almost two …
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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
… revisited a number of notable achievements that showcase our collaborations and capabilities to enable great science … effective in organizing, training and deploying hundreds of community members in their neighborhoods and nearby forests … Laboratory SOD Blitz Project SODmap Mobile Oak SOD Testing Program (OakSTeP) California Oak Mortality Taskforce   …
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JGI-UC Merced Interns Share Their 2021 Experiences
… virtually with JGI mentors to investigate rigorous research projects, hone science presentation skills, and participate … in professional development enrichment activities. For some students in the 2021 cohort, this was their first … for their PhD research. And for the first time in this program’s history, two interns returned to re-engage with …
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Next generation sequencing data of a defined microbial mock community
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Marine Microbe Contains Multitudes
… genomics reveals one bacterial species is made of four ecologically distinct groups with different lifestyles. … cells and their gene expression, the team then sequenced community genomes and expressed gene transcripts … (Berkeley Lab), through the JGI Community Science Program . The metagenomes were also processed using the …
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Emiley Eloe-Fadrosh
… viruses. Prior to joining the JGI, she was a Bioinformatics Program Fellow at the Gordon and Betty Moore Foundation as … et al. 2023. Cohort-based learning for microbiome research community standards. Nat Microbiol . 8(5):751-753. Nayfach … Evolution & Genomics, F1000Prime Reviewer for major journals and funding agencies and philanthropic organizations …
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Kjiersten Fagnan
Kjiersten Fagnan began working with JGI in 2012 as a NERSC bioinformatics computing consultant, after completing a petascale … approaches in support of meeting DOE mission critical programmatic goals. … Joubert et al., “Attacking the Opioid …
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Enlarging Windows into Understanding Gene Functions
… of the alphabet. Yet the specific sequence of these four letters represents an organism’s genetic code, or … Center in Hungary. His approved proposal through the JGI’s Community Science Program (CSP) focuses on a fungal comparative ENCODE project known as …
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JGI@25: A Single Cell, Myriad Microbial Discoveries
… revisited a number of notable achievements that showcase our collaborations and capabilities to enable great science … cell. Several years later, the continuing single cell sequencing collaboration between the JGI and Bigelow Lab led … genomics have afforded JGI users and the larger research community a means to access microbial lineages from a …
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A data analysis and coordination center for the human microbiome project
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Programmed DNA destruction by miniature CRISPR-Cas14 enzymes
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