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Gene Expression: From On-Off Switch to Dial
… gene expression helps identify variants in yeast genes. The Science Scientists have developed a more nuanced library … published in the  Proceedings of the National Academy of Sciences (PNAS), offers more ways for scientists to explore … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …
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JGI Hosts GPU Hackathon in May
Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility, aims to explore applications in the life sciences that can be ported to the GPU architecture. A GPU … per team. Participants will be expected to have some experience with OpenACC or CUDA – links to training …
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Fungus Fuels Tree Growth
… growth of poplar, a potential biofuel feedstock.     The Science The fungus  Mortierella elongata enjoys a dual … The cuttings included genotypes from the DOE BioEnergy Science Center (BESC), predecessor of  DOE’s Center for … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, through its  Community Science …
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Ben Bowen
… and optical devices 1997: NSF Interdisciplinary research experience for undergraduates fellowship … Raad, M., Rond, …
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Computationally Classifying Fungal Lifestyles
… on sequenced fungal genomes to classify gene families. The Science As a proof of concept, researchers developed an … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … . This work was enabled in part through  JGI’s  Community Science Program (CSP) , as several approved proposals have …
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Characterizing Communities: JGI Announces Latest CSP Portfolio
… to Africa to global oceans. Through the Community Science Program of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility, 24 large-scale proposals have been … new investigator proposal last year, and he noted that the experience proved beneficial for the large-scale call. “I am …
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Streamlining Regulon Identification in Bacteria
… transcription factors with their target genes. The Science Regulons are a group of genes that can be turned on … coelicolor . The Impact As an integrative genome science user facility, connecting genes to functions is part … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …
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Better Genome Editing for Bioenergy
… to enable improvements in microbial oil production. The Science CRISPR-Cas9 is a powerful, high-throughput … of Energy Joint Genome Institute (JGI), a DOE Office of Science User Facility. Y. lipolytica is a tantalizing … gene is actually essential. Through the JGI’s  Community Science Program , the scientists thus set out to identify …
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Cataloging the Microbes that Manage the Health of River Systems
… on river microbes in 90% of US continental watersheds. The Science In a recent Nature paper , researchers describe a … points to the information. The team harnessed a community-science program to collect samples from across the country … remain understudied. Through the JGI’s Community Science Program, Colorado State University researchers led a …
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Tracing the Evolution of Shiitake Mushrooms
… diversity of white rot fungi in the genus Lentinula   The Science Shiitake mushrooms get their name from the same … and transcriptome sequencing were enabled by the Community Science Program (CSP) at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …
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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
… genetic toolkit of ancestral and present-day plants The Science In a recent  Nature Genetics paper , researchers … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory through the Community Science Program . The comparative framework provided by …
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Biosynthesis of Haloterpenoids in Red Algae via Microbial-like Type I Terpene Synthases
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