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Olpidium, The Key to the Origin of Terrestrial Fungi
… Before 2006, Olpidium was one of the many obscure fungi of Chytridiomycota (the “chytrids”).  A … fungi by James et al. and Sekimoto et al . In both studies, however, Olpidium was unexpectedly grouped with … events when fungi first invaded land. Intuitively, it makes much sense. Transition to the terrestrial ecosystems …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… Large-scale comparative analysis leads to identification of biosynthetic gene … ), enhance plant health, cause diseases, and produce antibiotics. Still, the team estimates that genomic … physiologically and enzymatically, with descriptions of how their activities influence biochemical reactions. For …
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Applying Viral Genomics Expertise to Understanding the Human Virome
… JGI researchers lend expertise to develop tools and data hub for NIH program. While the microbes in, on and … global researchers on projects related to understanding how the interactions between viruses and their host microbes … latest strategic plan (download a copy  here ) describes how understanding these nutrient cycles can help researchers …
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Coordinating Environmental Genomics and Geochemistry Reveals Metabolic Transitions in a Hot Spring Ecosystem
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Production of Fungal Mycelia in a Temperate Coniferous Forest Shows Distinct Seasonal Patterns
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Transcriptomic Analysis of the CAM Species Kalanchoë fedtschenkoi Under Low- and High-Temperature Regimes
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An Enzyme System to Help Catalyze Bioproduction of Plastic
… By characterizing the structure and function of a methylthio-alkane reductase system, … at a genetic level. Functional and structural experiments showed how the enzyme operates. It works as a two-part complex, … Lawrence Berkeley National Laboratory, is committed to advancing genomics in support of DOE Office of Science …
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Benjamin Cole
… Dr. Cole is interested in studying how plants interact with their environment. Prior to joining the Joint Genome Institute, his focus was primarily on how plants interpret different light cues by altering their … University of California, San Diego (PhD, 2011) Rensselaer Polytechnic Institute (B.S., …
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JGIota: A Surprise for Chloroflexota — The First Flagella!
… To understand how organisms adapt to extreme environments, Marike Palmer and … Brian Hedlund study organisms living in hot springs. Hear how their recent work revealed more about the history of the …
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JGI@25: Studying Sorghum’s Survival Skills
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and capabilities to enable great … Both sugarcane and corn share this photosynthetic pathway. However, neither crop shares sorghum’s hardiness, so …
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Fungal community assembly in drought-stressed sorghum shows stochasticity, selection, and universal ecological dynamics
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A framework genetic map for Miscanthus sinensis from RNAseq-based markers shows recent tetraploidy
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