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JGI announces 2023 CSP Functional Genomics awardees
… the JGI accepts proposals for state-of-the-art functional genomics research from potential users who need help … into biological function. Through our CSP Functional Genomics call , we look for projects that will leverage the …
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JGI@25: Strengthening Soybean
… to sequence — roughly 1.25 billion Gb (gigabasepairs — most fungi are around 50 million Mb, or megabases, in size). So, …
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Busting the Unbreakable Lignin
… New evidence shows anaerobic fungi can degrade the hardiest of plant components   The … process. Now, a new study shows how anaerobic fungi — the kind living in the stomachs of livestock — are … components into  biofuels and bioproducts. If anaerobic fungi could be used to effectively modify lignin without …
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JGI announces final round of 2022 Functional Genomics awardees
… the JGI accepts proposals for state-of-the-art functional genomics research from potential users who need help … into biological function. Through our CSP Functional Genomics call , we look for projects that will leverage the …
Learn more
Webinar: MycoCosm Tutorial
… to be proposed for genome sequencing, or only “true fungi”? A(nswer): Our focus is on fungi, algae, plants, and … ( https://jgi.doe.gov/our-science/science-programs/fungal-genomics/ ). You can also contact us for additional details. … sequences? Also from plants, etc.? A: MycoCosm is a fungal genomics and multi-omics resource. JGI also has designated …
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Supercharging SIP in the Fungal Hyphosphere
… probing helps ID novel interactions between bacteria and fungi The Science Researchers have successfully automated … results. Applying this method to the study of a particular fungi, researchers identified novel interactions between bacteria and the fungi. The Impact Stable isotope probing is a long and …
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Improving the Cacao Genome and Phytozome
… Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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JGI Contributes Eight to 2023 Highly Cited Researchers list
… Grigoriev’s recent work includes the discovery of anaerobic fungi’s ability to break down lignin , the hardiest of plant … new genomes highlighting the diversity of white rot fungi in the genus Lentinula. Dan Rokhsar looked to the … as a Nature Microbiology study that leveraged population genomics to investigate archaeal hitchhikers and found that, …
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JGI Scientists Pen Genome Watch Articles
… Laboratory, are sharing their expertise in environmental genomics by writing for the column Genome Watch in  Nature … the human genome. Today, the Sanger Institute focuses on genomics to understand human and pathogen biology. Du Toit … Watch articles as a way to expose readers to a broader genomics perspective. Woyke spread the word among her JGI …
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Computationally Classifying Fungal Lifestyles
… genomes of Dothideomycetes, the largest class of fungi, by lifestyles. The machine “learned” to identify data … species.  The Impact The class  Dothideomycetes includes fungi that obtain nutrients from decaying organic matter … Dothideomycetes could provide more insights into how these fungi have adapted to stress and host specificity, …
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JGI@25 RECAP: 2022 Annual Meeting features historical perspectives on JGI’s 25 years
… of these talks below, starting with Ari Patrinos. The Genomics Arms Race Ari Patrinos , Former Director of DOE’s … artist Nigel Sussman recently finished at the Integrative Genomics Building, the JGI’s home at Berkeley Lab. Like the … He reminisced over the building of the Integrative Genomics Building, the JGI’s home at Berkeley Lab, as …
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High Five: Celebrating the JGI-UC Merced Genomics Internship Program
… around the world. That said, we recognize that workforce in genomics, including JGI, is not representative of the … graduate student summer research experience at the JGI, the Genomics Internship Program expanded to include UC Merced … students’ efforts. Ben Cole, a project scientist in Visel’s Genomics of Plant-Microbial Interactions Group who has …
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