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John Vogel
… served as a Research Molecular Biologist at the USDA for 12 years where he was a driving force behind the development of …
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Picking Up Threads of Cotton Genomics
… the simplest cotton genome ( G. raimondii ) several years ago. Studying the cotton genomes provides breeders … lineages had dispersed and diversified over a million years ago, their genomes were “remarkably” stable. “We … will derive benefit from this high impact science for years to come,” said Don Jones, who handles variety …
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JGI Early Career Researchers Featured in mSystems Special Issue
… the authors who offer perspectives on what the next five years of innovation could look like. In one article, … studying virus-host dynamics in nature. In the last few years, mapping the planet’s viral diversity has advanced …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
… biofuel feedstocks with less fertilizer. For millions of years, underground fungi have lived in symbiosis with plant …
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New Research Sheds Light on Diversity in the Deep Sea
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Igor Grigoriev
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Pinning Down a Piece of Photosynthesis
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Olpidium, The Key to the Origin of Terrestrial Fungi
Olpidium zoospores remained largely untouched until seven years later. In 2018, as members of the ZyGoLife consortium … to the sequencing effort by the JGI and ZyGoLife in recent years. With the much more extensive taxonomic and genetic … diversification events occurred approximately 650 million years ago, and that the first terrestrial fungi predate the …
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The More the Merrier: Making the Case for Plant Pan-genomes
… more than once, and these events took place a million years apart: the individual with a maternal  B. distachyon parent (D plastotype) some 1.4 million years ago (Mya), while the S plastotype was a more recent … anticipated with only minor gene loss even after a million years.” Reference genomes for  B. distachyon ,  B. stacei …
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Identifying the Microbial Cleanup Crew at a Superfund Site
… aquifer in 2007 to achieve this goal. In less than four years, parts of the shallow portions of the groundwater were … remain.  To identify the microbes involved in the early years of the biodegradation process, researchers collected … the National Center for Research Resources (NCRR) (5P20RR016480-12) and the National Institute of General Medical …
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Designer DNA: JGI Helps Users Blaze New Biosynthetic Pathways
… papers, including two Nature Plants publications, in five years, have come out of the JGI-supported project. “The JGI … of the DNA Synthesis Science Program by applying to the year-round Community Science Program Functional Genomics …
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Doubling Down on Known Protein Families
… but we knew the families,” Kyrpides said. Yet, “almost 20 years of metagenomic data and metagenomic analysis, and … of new protein families had started to plateau in recent years, perhaps suggesting that scientists had “captured” … getting more protein families,” Kyrpides said. “In a few years, as we keep on sequencing more metagenomes, some of …
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