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… results this year by assembling a collection of large datasets that will enable scientists to explore and collect data in new ways,” she said. “We’re excited to be able to offer this … and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and …

… Historically, work on sorghum has focused on producing high-quality reference genomes. By cataloguing a genome sequence … with resequencing of 1,984 cultivars and landraces, these data capture the diversity of this crop across geographic … for future analysis and discovery. “We're building the data sets that are needed to build the algorithms of the future. …

… to the 2023 Highly Cited Researchers from the JGI recognized for their “significant influence in their … Nikos Kyrpides, Natalia Ivanova and Simon Roux, along with data from a consortium that included Susannah Tringe and … and Roux also worked together on the development of a new software tool called geNomad that identifies and …

… in the ~ 30 – 100ng range. Note that beyond quantity, input quality (i.e., presence of “intact” high-molecular weight … sequenced without pooling, which yields ~ 180 Gb of data per library. Q: How much DNA/coverage is required for … part of our data analysis plan mapping of short-reads datasets (metagenome or metatranscriptome) to a relevant …

… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … identified. The JGI researchers surveyed publicly available data in the JGI’s  IMG/M database , information the Probst lab used to search …

… the microbes that play roles in the methane cycle. Their data report, which provides the only known reference microbiome data sets for the Loxahatchee Refuge,  was published in the … “When I originally envisioned the project of the class, I knew that I wanted them to write a final paper that  could be …

… This summer, the DOE JGI hosted 10 interns who came from a wide range of … Many of them spent the summer crunching genomic data at a computer; a few had the opportunity to spend time …

… 2022 marks the JGI’s 25th anniversary . Over the next few months, we’ll be … solve energy and environmental challenges. Over the past 25 years, the JGI has hosted interns from a number of …

… genes involved in agronomic traits related to nutritional quality and disease resistance  due to the sequence’s availability via Phytozome. In 2015,  a new and revised version brought the soybean sequence up to … and that’s going really well. And having the sequence data available for us to enable that research will have a …

… organisms and ecosystems. Scientists are engineering next-generation feedstocks through CRISPR-edited poplars … microbial bioreactors. This genomic research creates new opportunities for biomanufacturing, from industrial … (NEON) in collaboration with the National Microbiome Data Collaborative (NMDC) to produce open metagenomics data. …