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… intensifying collaborations in the fields of genomics, structural biology, bioimaging, and water research. The meeting … challenges.”  During the workshop UDE and Berkeley Lab scientists discussed a diverse range of topics related to … applications, for example, or the timely controlled start of a biochemical reaction which can then directly be …

… how humans could do the same on an industrial scale to produce biofuels . Since one of the challenges of developing … in the journal Science. It detailed how they’d used metagenomics — a then-novel approach which allows scientists to study microorganisms that can’t be cultured by …

… 13 will become the current, and only, version of Phytozome accessible as an interactive website. Since May 2019, v12 … Phytozome, with a more intuitive interface, deployed on much more maintainable software and hardware infrastructure. Phytozome v13 has been accessible to users since 2019.  We have attempted to make …

… with little or no oxygen, life had found other ways to produce energy, using a process called fermentation. To better … mission. Fermentative metabolism occurs in environments such as ruminant guts, sediments, and anaerobic bioreactors. Aside from producing energy that the organisms can use to thrive, the …

… the JGI accepts proposals for state-of-the-art functional genomics research from reseachers who translate genomic … into biological function. Through our CSP Functional Genomics call , we look for projects that will leverage the … This year’s project goals range from improving crop productivity for bioenergy through enhanced red-light energy …

… A team has optimized a crucial part of CRISPR-Cas9 technology to enable improvements … a powerful, high-throughput gene-editing tool that can help scientists engineer organisms for bioenergy applications. … Through the JGI’s  Community Science Program , the scientists thus set out to identify which sgRNA sequences …

… the JGI accepts proposals for state-of-the-art functional genomics research from potential users who need help … into biological function. Through our CSP Functional Genomics call , we look for projects that will leverage the …

… Building off the previous year’s project, undergraduate interns Tamyra Long and Zyiah Mikes worked with mentors Yi Zhai and John Vogel from the Plant Functional Genomics Group to study the effects of  Brachypodium … microbiome data using different programming languages such as Python, Bash, and RStudio. We also learned how to run …

… the JGI accepts proposals for state-of-the-art functional genomics research from potential users who need help … into biological function. Through our CSP Functional Genomics call , we look for projects that will leverage the …

… another user facility at Berkeley Lab. geNomad is now accessible through the National Microbiome Data … can affect a microbe’s ability to cycle nutrients or produce new chemicals. They can also affect ecosystems by … genomics of MGEs and their evolution at the cellular level, scientists can better understand ecosystem-wide processes. …

… Dr. Vogel joined JGI in 2014 to establish a plant functional genomics program. Prior to this, he served as a Research … in an effort to create improved varieties for biomass production. He did his postdoctoral studies at the Carnegie … interact with their microbiomes. In addition, his group conducts comparative genomic research to understand the …