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Fungal & Algal Program
… to unlock their potential for bioenergy, environmental sustainability, and bioproducts. By sequencing and analyzing … genomic potential into practical applications, including sustainable biofuels, biomaterials, natural products, and … an international research team in collaboration with the JGI. Conserved Fungal Genes of Unknown Function offer a …
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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
As warm-adapted microbes edge polewards, they’d oust resident tiny algae. The cold polar oceans give rise to … other words, some like it hot; some do not. “We can think about the ocean, naively, as a sort of homogeneous medium. … Panel on Climate Change (IPCC) 5th Assessment Report to predict where and how fast the 14° Celsius …
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Help from Citrus’ Bitter, Hardier Cousin
… disease-resistance that could prove fruitful for saving Citrus from greening disease. You’ve probably never heard of … a disease ravaging citrus groves: citrus greening. From 2012 to 2016, in Florida alone this disease caused an … the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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A Community Resource for Secondary Metabolite Researchers
The Secondary Metabolism Collaboratory encourages user engagement. The Science In addition to the core set of … of genes known as biosynthetic gene clusters (BGCs.) As reported in the recent Database issue of the journal Nucleic … of the closest comparable database. … Dan Udwary talks about the Secondary Metabolism Collaboratory  … Browse BGCs …
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Scaling Up Existing Skill Sets
Over the course of the summer, the JGI-UC Merced Genomics Internship paired six UC Merced … experience working intermediately between academia and industry, which is something I didn’t even know existed before. … my Ph.D. What is/has been one of your favorite things about your JGI internship?  Doing the JGI internship has …
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Picking Up Threads of Cotton Genomics
… of the five major lineages of cotton;  G. tomentosum ,  G. mustelinum , and  G. darwinii are the others. All of these … another study co-author at Texas A&M University. “This report establishes new opportunities in multiple basic and … is one such example.” Jones noted that he talks to growers about Cotton Inc.’s long-term investment in crop research. …
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Community Science Program
… sequencing, synthesis, and metabolomics at the JGI for projects of relevance to Department of Energy (DOE)  … and analysis will be performed by the JGI at no cost to the user. … All proposals first undergo technical review by JGI … at large. In most cases where the JGI provides more customized analysis, the JGI also participates in publication …
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Ben Bowen
… in mass spectrometry-centered projects, Dr. Bowen’s work focuses on developing high-performance computing workflows and … Berkeley Lab Director’s Award for Exceptional Achievement 2012 UC Berkeley, Leadership and Development Program Awardee … imaging for in situ kinetic histochemistry. Scientific reports, 3(1), 1656. Rübel, O., Greiner, A., Cholia, S., …
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Adam Reisselman on being a 2016 DOE Computational Science Graduate Fellow
… with advanced computer skills. During the summer of 2016,  DOE CGSF recipient Adam Riesselman of Harvard University worked with DOE JGI's Sam Deutsch. Learn more about the DOE Computational Science Graduate Fellowship …
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Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities
The JGI Engagement Webinar held November 5, 2020 (watch the  … from plants, microorganisms, and environmental samples using targeted and untargeted approaches. The webinar … with metabolomics analysis.  Q: Can you give us an idea about the scale of an average study? How many samples are …
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Exploring Possibilities: 2022 JGI-UC Merced Interns
… have influenced their careers in science. Hear more about what they learned from working with their JGI mentors, what challenges they overcame, and what new … Foster Irina Birskis Barros and mentors Elle Barnes and Susannah Tringe Shari Larsen and mentor Robert M. Bowers …
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Conserved unique peptide patterns (CUPP) online platform 2.0: implementation of +1000 JGI fungal genomes.
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