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… bioinformatics pipelines and a laboratory information management (LIMS) system. He previously led the NGS Software team and metagenomic data platform … discovery platform. WO2021163637A1 , PCT application PCT/US2021/018050 (published 2021). Arkin, AP, et al. KBase: The …

… Science In a recent  Nature Genetics paper , researchers focused on the full composition of genes, or pangenome, of the … Summary As the planet has changed, so have plants. Curious about their ability to adapt to changing environments, … and in flowering plant lineages.   With the information about  Marchantia -specific innovations and adaptations, …

… scale: fungi stretch a network of tendrils called arbuscules into a plant’s root cells, and both organisms … been able to study both sides of this interaction up close, using RNA sequencing to understand gene expression: one of … circular capture areas roughly 55-microns in diameter — about the width of a human hair. At such resolution, this …

… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … repositories, as well as project data entered by external users. The Impact One of the significant challenges in … in centigrade, and more.  The four level project organization system implemented in GOLD consist of: Studies, …

… be single bacterial cells, visible to the naked eye. The unusual size is notable because bacteria aren’t usually … explained. “This kind of discovery opens new questions about bacterial morphotypes that have never been studied … microorganisms. “We started this project under the JGI’s strategic thrust of inter-organismal interactions, because …

… lineages. The Science From the distinct smell of eucalyptus to the flavor of wine, terpenes are ubiquitous. A diverse group of plant-produced organic compounds, … against those of E. grandis to find differences in genome organization between the two species. The work was reported …

… Through the  “Facilities Integrating Collaborations for User Science” (FICUS) call between the JGI and the  … Biology .  Watch this webinar hosted by EMSL to learn more about BioSANS. Letters of Intent are due March 17, 2021 for … also welcome to apply to the FICUS program. Find out more about the FICUS program at:  jgi.doe.gov/user-programs . Q:  …

… This shorter episode is about a tiny, single-celled alga – Chlamydomonas reinhardtii … managed to sequence its genome, and what it has to teach us about other organisms – like plants. [ Editor’s Note: …

… Miscanthus  sequence offers insights into benefits of polyploidy and … and genomic toolkit for the perennial grass Miscanthus sinensis has been published. Analysis of the genome … insights into how the multiple chromosomes of Miscanthus arose by ancient hybridization (polyploidy) and insights …

… analysis.  MycoCosm provides data and tools via a graphical user interface, ensuring that no programming knowledge or … is required to perform computational analyses. The Mycocosm user interface is designed for use by mycologists and researchers, facilitating the …

… Dehalococcoides mccartyi and  Dehalobacter restrictus,  that work together to break down PCE into the chemical … by Congress in 1980 for Superfund sites which are hazardous waste areas that require cleanup and long-term … The DOE has been similarly invested in environmental management, contributing to bioremediation efforts for …