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Doubling Down on Known Protein Families
… Using a novel computational approach, researchers confirm … genes from isolates, there isn’t much scientists can tell about its function or its origin. As a result, these genes … explained. “That is definitely material that the scientific community now can use further. Let’s say somebody …
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Here, There and Everywhere: Large and Giant Viruses Abound Globally
… expands the global diversity of large and giant viruses. While the microbes in a single drop of water could … they are found everywhere, comparatively little is known about viruses, much less those considered large and giant. … work also used resources of the  National Energy Research Scientific Computing Center (NERSC) , another DOE Office of …
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John Vogel
… to this, he served as a Research Molecular Biologist at the USDA for 12 years where he was a driving force behind the development of numerous genomic resources that fostered the widespread adoption … transformation pipeline and, in collaboration with industrial partners, generated hundreds of transgenic …
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SPRUCE-ing Up Science
… of biology and computer science, to reveal clues about how microbial and bacteria communities influence the … on his PhD program at UC Merced in 2013, this field was just beginning to develop and expand into the world of … in machine learning. Despite working alongside his scientific idols, Lawrence recalls feeling very comfortable. …
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JGI Accepts 17 Proposals for Community Science Program
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … Laboratory (Berkeley Lab). They were selected through peer review from 41 full proposals out of 50 letters of intent … experiment, Kristen DeAngelis of the University of Massachusetts Amherst and colleagues are studying how chronic …
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The JGI announces 2024 awardees for our Community Science Program annual call
… proposals this year,” noted Tanja Woyke, who heads JGI’s User Programs. “These PIs have proposed research that addresses various important scientific questions relevant to the DOE’s mission, and I … nutrient cycling, and biogeochemistry. You can learn more about this call, as well as smaller-scale calls including …
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Scaling Up Existing Skill Sets
… experience working intermediately between academia and industry, which is something I didn’t even know existed before. … my Ph.D. What is/has been one of your favorite things about your JGI internship?  Doing the JGI internship has … as JGI/LBNL. What is/has been one of your favorite things about your JGI internship? My most favorite parts of the …
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Uncovering Novel Genomes from Earth’s Microbiomes
… analysis leads to identification of biosynthetic gene clusters for novel secondary metabolites for multiple … she said. Listen to study co-author Dan Udwary talk about genome mining using the GEM catalog in  this episode … work also used resources of the  National Energy Research Scientific Computing Center (NERSC) , another DOE Office of …
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Ben Bowen
… in mass spectrometry-centered projects, Dr. Bowen’s work focuses on developing high-performance computing workflows and … chemoinformatics, and bioinformatics facilitates impactful scientific discoveries, supporting the DOE’s Biological and Environmental Research user community in their bioenergy and environmental …
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Picking Up Threads of Cotton Genomics
… of the five major lineages of cotton;  G. tomentosum ,  G. mustelinum , and  G. darwinii are the others. All of these … establishes new opportunities in multiple basic and applied scientific disciplines that relate directly and indirectly … is one such example.” Jones noted that he talks to growers about Cotton Inc.’s long-term investment in crop research. …
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Webinar: SIP technologies at EMSL and JGI
… and the JGI’s Rex Malmstrom provided background on the various isotope-related technologies available at JGI and EMSL … the pandemic. 3. Q: What instrument / method does the JGI use to pre-screen DNA for enrichment? A:  The JGI uses … C13 and sort of the isotope of proteomics, what about doing this with metabolites at EMSL? A:  The answer to …
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JGI Earth Month: The Unusual Metabolism That Helps Plants Withstand Drought
… for Audio   ALISON:  Hey! I’m Alison Takemura at the US Department of Energy Joint Genome Institute, or JGI.  Two … meetings were still a thing, i.e. in January. She talked about her  Community Science Project proposal with JGI, in … that’s an example of a yucca species. And the cool thing about yuccas is that there are closely related species that …
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