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JGI-KBase Panel at SACNAS
… Nov. 2: Getting Credit for Scientific Contributions of Any Size What is considered to be a scientific … establishing a professional presence through getting credit for any scientific contribution they make, whether as part …
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JGI@25: Following Fungi that Pry Apart Plant Polymers
… Over the last year, we’ve been revisiting a number of notable achievements that showcase our collaborations and … a chemical and biological engineer at the University of California Santa Barbara. So plants don’t break down without a … that biomass could serve as the starting material for a wide range of fuels and chemicals. To get to that …
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… shed more light on microbial communities than ever before — especially with the prospect of meta-analyses boosted by AI and Machine Learning — JGI … quantitative SIP analysis as a capability in proposal calls to the U.S. Department of Energy (DOE) Joint Genome …
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Effects of Polar Light Cycle on Microbial Food Web
… Populations of Antarctic lake microbial communities change with the … occupy more space on Earth than any other ecosystem. Therefore, understanding the microbial activity that dominates … sulfur bacteria population spiked to 83%, only to dramatically fall to 1% in early spring and rebound by the late …
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Cell by cell: population genetics in the wild
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Identification of candidate genes in Arabidopsis and Populus cell wall biosynthesis using text-mining, co-expression network analysis and comparative genomics
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A Standardized Synthetic Eucalyptus Transcription Factor and Promoter Panel for Re-engineering Secondary Cell Wall Regulation in Biomass and Bioenergy Crops
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Mission
… JGI Mission As a U.S. Department of Energy Office of Science user facility, we provide advanced genomic … and manufacturing. Genomic science lies at the heart of biology, providing the foundational knowledge to … and AI-driven analyses that convert biological information into actionable insights and solutions. …
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GenomeOcean Leverages AI to Decode Nature’s Secret Language
… genome discoveries. Unlocking the intricate details of life’s genetic blueprint has long been a significant … available data, GenomeOcean employs artificial intelligence for cutting-edge genomic research — and is capable of … help avoid common pitfalls that similar models have historically faced.  “There are two things: We want to make sure …
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User Advisory Committees
… All staff members of the US Department of Energy (DOE) Joint Genome Institute (JGI) commit to … to establish with our stakeholders. The guiding principles for participating on JGI Advisory Committees are outlined in … The UEC represents the JGI user community and is responsible for providing input and advice on JGI policies and practices …
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From Berkeley to Binghamton: Tracking Strawberry Evolution
… In the summer of 2015, Adam Session was a postdoc working at the DOE Joint … also holds a joint appointment with the University of California, Berkeley. Nowadays, Session is an Assistant … the set of chromosomes from each ancestor is called a subgenome. Session and Rokhsar, building on work …
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Tracing the Evolution of Shiitake Mushrooms
… New genomes highlight the diversity of white rot fungi in the genus Lentinula   The Science … 60 existing sequences, this work expands the family tree for Lentinula. Within those samples, this study also tracks … to decay wood were widely conserved across species. Specifically, many species had very similar plant cell wall …
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