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Gotta Catch 'Em Gall
… BioEnergy Institute) are looking for new ways to engineer plants. So they’ve looked into wasps that program oak trees …
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Susannah Tringe Named 2020 DOE Lawrence Award Recipient
… Congratulations to Susannah Tringe , one of eight scientists and engineers who received the 2020 … Tringe, a microbiologist, was recognized for “advances in sequence-based studies of microbial assemblies, revealing … communities in carbon cycling, in interactions with plants, and as drivers of methane production, nutrient …
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EcoFAB 2025: Advancing Mechanistic Microbial Science Using Fabricated Ecosystems
… studies.  This conference is inspired by the vision of standardized fabricated ecosystems (EcoFABs) designed for precise manipulation and reproducible experimentation of microbiome dynamics. Together, we will explore …
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Virus-Microbe Interactions of Mud Island Mangroves
… a graduate student in Brett Baker’s lab at the University of Texas at Austin, will defend his dissertation. Some of his research was conducted at the JGI through the DOE Office of Science Graduate Student Research (SCGSR) program …
Learn more
Introducing New Members of the JGI User Executive Committee
… JGI User Executive Committee (UEC) : Roland Hatzenpichler of Montana State University, Teresa Pawlowska of Cornell University, and Jana U’Ren (pronounced … shaping the assembly of fungal endophytes across land plants and lichens, mentioned her interest in guiding JGI …
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Access to Rock Star Scientists
… their work delivered during the 5th anniversary celebration of the internship program. Candace Cole, UC Merced JGI Mentors : Ben Cole & Axel Visel, Genomics of Plant-Microbial Interactions “The summer internship has …
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JGI Workshops at 33rd Fungal Genetics Conference
… Wednesday, March 18: "Genomics of Environmental Opportunism: Fungal Adaptation at the Edge of Pathogenicity" Workshop Steven Ahrendt presenting  … Friday, March 20: JGI-EMSL Workshop: "Toward 10,000 Fungal Genomes and Phenotypes" …
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MycoCosm Tutorial
… more about MycoCosm, a data portal with over 2,000 fungal genomes and multi-omics datasets, equipped with interactive …
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JGIota: A Tool to Find the Nomadic Genes that Help Microbes Adapt - geNomad
… A quick snippet on Antonio Camargo and Simon Roux, a few of the JGI researchers behind software that finds plasmids and viruses within microbial genomes. As mobile genetic elements like viruses spread …
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The Mobilome in the Mire
… researchers have known that many datasets miss a key part of microbial genomes: the mobile genetic elements, or MGEs, that can move …
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DOE JGI Interns Share Their Summer Experiences
… the DOE JGI hosted 10 interns who came from a wide range of backgrounds. Many of them spent the summer crunching genomic data at a … summer were: Rida Ali, who worked with T.B.K. Reddy on the Genomes OnLine Database; Sarah Fruchart , who worked with …
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Kjiersten Fagnan
… closely with staff to understand the data-intensive nature of JGI workloads. Dr. Fagnan was appointed CIO of the JGI in 2016, and in 2018 was hired to be the JGI’s … Methodologies workshops. In 2018, Dr. Fagnan was part of the Gordon Bell prizewinning team at the Supercomputing …
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