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Corals in Hot Water Get Help From Their Microbes
… As waters warm due to climate change, corals are in mortal peril. But corals comprise multiple organisms: a coral host, a photosynthetic microalgae, and a little-characterized microbiome. When warm …
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A Pinch of Salt Activates Silent Gene Clusters in Streptomyces
… blueprints for dozens of complex compounds, but stay largely dormant under standard conditions. As described in a recent issue of mSystems , scientists found that adding salt to the growth … never been mapped in this detail before.     The Impact By revealing how a single stress signal rewires a bacterium's …
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The Fungi That Survive In Antarctica
… Black fungi are microscopic and mighty. They survive everywhere from Antarctica to Joshua Tree National Park, despite …
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Decoding Yellowstone’s Microbial Mats
… Life as we know it wouldn’t exist without cyanobacteria; they began oxygenating Earth over two billion …
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THE Bioenergy Tree
… The US Department of Energy’s favorite tree is poplar. They’re the fastest growing trees in the Northern …
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Fungal Friends or Foes in Plant Roots
… Uncovering associations between plant roots and fungi that can help or … cell walls and break down plant sugars. The results also revealed that the most beneficial fungi in root mycobiomes … of the key community participants and enabling future metagenomics studies.   …
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JGI@25: Studying Sorghum’s Survival Skills
… In honor of the JGI's 25th anniversary in 2022, we have revisited a … hardiness. Even with little water, full sunlight and hot temperatures, sorghum plants can photosynthesize and thrive … Sorghum bicolor on Phytozome … Learn more on the EPICON project … Also on Phytozome …
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Steven Wilson
… Since 2018, Mr. Wilson has served as the Systems Engineering Group lead.   The … sequence quality control and automation of microbial/metagenomic assemblies, portals that make data available to the … BS in BioEngineering, University of California, Berkeley … Education …
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JGI Pitches 2022 Visiting Faculty Program Collaborations
…   On November 3, 2021, the JGI and the Workforce Development & Education department of Lawrence … Program Ellen Dow and Elisha Wood-Charlson for the DOE Systems Biology Knowledgebase (KBase) Ian Blaby for the JGI DNA …
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Webinar: SIP technologies at EMSL and JGI
… The Environmental Molecular Sciences Laboratory (EMSL) and the Joint … 1. Q(uestion): How much DNA is required for the JGI SIP metagenomics pipeline? A(nswer):  The more the better. We want … harvest the sample, then we can put it into the laser system 7. Q: Can radioactive isotopes be used at EMSL? A: No. …
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Understanding Wildfire Recovery, Starting in Soil
… A metagenomic look at the soil microbes present a year after a … the soil. To get a clearer picture of how burned ecosystems return to health, researchers have taken a look at … helped fungi, bacteria and viruses survive. With this metagenomic analysis, it was possible to identify specific …
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Streamlining Regulon Identification in Bacteria
… RIViT-seq technology could speed up associating transcription factors with their target genes. The … This work was supported by the U.S. Department of Energy Office of Science under Contract No. …
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