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Benjamin Cole
Dr. Cole is interested in studying how plants interact with their environment. Prior to joining the Joint Genome Institute, his focus was … of Cell Identity as an R package … Education … Selected Publications … Software …
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Access to Rock Star Scientists
Through the JGI-UC Merced Genomics Internship, graduate students Candace Cole, Mo Kaze, Akshay Paropkari, … in Walnut Creek. The students’ research culminated in presentations on their work delivered during the 5th anniversary celebration of the internship program. Candace Cole, UC Merced JGI …
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Hiroshi Otani
Since joining the DOE Joint Genome Institute in 2016, Dr. Otani has been studying secondary metabolism in microbes, … that facilitate discovery of new secondary metabolites. Prior to joining the JGI, he studied transcriptional … Mol. Microbiol. 87, 1223-1236. PubMed … Education … Publications …
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Notes on the Microbial Diversity of Puerto Nuevo’s Coastline
Puerto Nuevo is a small town along the Baja California coastline in Mexico. … UC Merced graduate student Sabah Ul-Hasan and alumnus of the JGI-UC Merced Genomics Internship Program, first sampled the area in summer 2016.  She …
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Three Join the JGI User Executive Committee
Committee (UEC) recently welcomed three new members earlier this month – Sneha Couvilion of Pacific Northwest National Laboratory, Chris Schadt of … As an early career investigator, she is committed to representing and advocating for early career users on the UEC. …
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A Step Toward Controlling Soybean Rust
The United States  is the world’s leading soybean producer , and soybeans … causes Asian Soybean Rust (ASR) and is the major pathogen of soybean. Left uncontrolled, soybean rust could reduce …
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Danielle Goudeau
Danielle operates the single-cell genomics pipeline for JGI … and 16S sequencing. She also develops novel flow cytometry protocols for targeted recovery of specific microbes. …
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Exploring Polymorphisms Created by Transposable Elements
My project at the Joint Genome Institute (JGI) was to measure the polymorphisms that transposable elements (TEs) …
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The Big Deal About Short Plants
Despite their diminutive stature, “short plants” such as mosses could be uniquely powerful in helping … sequences to what they do. But sequencing the genome of one short plant — fire moss — had an unexpected …
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Partnering with CalTeach – Training the Next Generation STEM Workforce
As set out in the JGI Five-Year Strategic Plan – “Beyond Basepairs, A Vision for Integrative … to further develop a more diverse and inclusive pool of talent for career opportunities at JGI and Berkeley Lab. …
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JGIota: The Algae Nicknamed ‘Chlamy’
This shorter episode is about a tiny, single-celled alga – Chlamydomonas reinhardtii – … in the Environmental Genomics & Systems Biology Division of the Berkeley Lab Biosciences Area.] …
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Exploring the Diversity of the American Prairie’s Switchgrass
A tall native plant of the North American prairie, switchgrass …
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