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Complete Genome Sequences of Desulfosporosinus orientis DSM765T, Desulfosporosinus youngiae DSM17734T, Desulfosporosinus meridiei DSM13257T, and Desulfosporosinus acidiphilus DSM22704T
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Accelerating Metagenomics Discoveries with Deep Learning
… On July 6, scientists from Lawrence Berkeley National Laboratory (Berkeley Lab) … biologist at the US Department of Energy (DOE) Joint Genome Institute (JGI), presented on generating vector … algorithm — a convolutional neural network, called  ResNet 34   — in order to vectorize protein sequences. Sevim is …
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Sequence to Function: Applications and Analysis for the Future (SFA²F)
… meeting brings together established and emerging scientists from academia, industry, and government organizations for … and informal networking events. JGI will present both a genome center talk and a tech talk. Stop by the JGI booth to …
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Katherine Louie
… techniques, the platform delivers rich metabolite profiles from diverse biological and environmental samples in support … products. Proc Natl Acad Sci U S A. 2021;118. doi:10.1073/pnas.2019855118 2. Murphy KM, Edwards J, Louie KB, Bowen … in maize (Zea mays). Scientific Reports. 2021. doi:10.1038/s41598-020-79320-z 3. Louie KB, Kosina SM, Hu Y, Otani H, …
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Alabama A&M Interns Access An Abundance of Knowledge
… In 2024, the DOE Joint Genome Institute and Alabama A&M University piloted an …
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The Surprising Structure of a Shrub Willow Sex Chromosome
… the study’s international team, which included scientists from Oak Ridge National Laboratory and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … complete sex chromosomes. The results were published in  Genome Biology . The team found that the shrub willow’s W …
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Conserved genomic collinearity as a source of broadly applicable, fast evolving, markers to resolve species complexes: A case study using the lichen-forming genus Peltigera section Polydactylon
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Genome sequence of the mud-dwelling archaeon Methanoplanus limicola type strain (DSM 2279T), reclassification of Methanoplanus petrolearius as Methanolacinia petrolearia and emended descriptions of the genera Methanoplanus and Methanolacinia
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JGI Announces 2023 Community Science Program Awardees
… to the proposers of the 19 proposals selected for the 2023 Community Science Program call of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … year’s recipients on our Twitter. Samples were collected from across a permafrost age gradient from the Fox …
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An Addiction Crucial to a Fungus’ Reproduction
… as a mutualist, where both species of organism benefit from association, but was predicted to have evolved from a … at Cornell University and scientists at the Joint Genome Institute, a DOE Office of Science User Facility was … JGI team sequenced and annotated a host genome (Rm ATCC 52813) as part of the 1000 Fungal Genomes project. As reported …
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iPHoP: A Matchmaker for Phages and their Hosts
… led by scientists at the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility at … Program awarded under UC-DOE Prime Contract DE-AC02-05CH11231. The work conducted by the U.S. Department of Energy Joint Genome Institute (https://ror.org/04xm1d337), a DOE Office …
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Mike Sneddon
… in the Data Science and Informatics Department at the Joint Genome Institute. His team of engineers and scientists … earned his PhD in Computational Biology and Bioinformatics from Yale University. … library and natural product discovery platform. WO2021163637A1 , PCT application PCT/US2021/018050 (published 2021). …
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