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Whole Genome Analyses Suggests that Burkholderia sensu lato Contains Two Additional Novel Genera (Mycetohabitans gen. nov., and Trinickia gen. nov.): Implications for the Evolution of Diazotrophy and Nodulation in the Burkholderiaceae
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Novel heavy metal resistance gene clusters are present in the genome of Cupriavidus neocaledonicus STM 6070, a new species of Mimosa pudica microsymbiont isolated from heavy-metal-rich mining site soil
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Mike Sneddon
… accomplished leader in data, software, compute, and AI for large-scale genomics and lab informatics. Prior to joining JGI in late … pipelines and a laboratory information management (LIMS) system. He previously led the NGS Software team and metagenomic … D., Serber, Z., Shock, J., Sneddon, M., and Yang, X. Metagenomic library and natural product discovery platform. …
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Genome sequences of key bacterial symbionts of entomopathogenic nematodes: Xenorhabdus cabanillasii DSM17905, Xenorhabdus ehlersii DSM16337, Xenorhabdus japonica DSM16522, Xenorhabdus koppenhoeferii DSM18168, and Xenorhabdus mauleonii DSM17908
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A Journey Through the Evolution of the Mitochondria Internship, A Sequential Read
… Greetings my esteemed reader, you’re reading this because either you are serendipitously here by accident or else are interested in …
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JGI@25: Solving the Mystery of the Missing Oil
… In honor of the JGI's 25th anniversary in 2022, we have … Berkeley Lab. Over the next decade, the JGI’s single cell genomics and metagenomics capabilities were harnessed in … & Environment Meeting: “What we wanted to do was apply a systems biology approach to the oil spill, looking at exactly …
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Viruses Reprogram Cells into Different Virocells
… Microbial cells infected by viruses undergo metabolic … infections can affect the interactions within their ecosystems. Summary Microbes drive the energy and nutrient cycles … Researchers have the opportunity to combine the power of genomics and molecular characterization offered at multiple …
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JGI Interns at UC Merced Earn CAMP Merit Awards
… As part of the ongoing partnership between DOE JGI and UC Merced to promote … minorities in science, technology, engineering and math (STEM) fields. At the 2016 CAMP Statewide Undergraduate …
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Cataloging the Microbes that Manage the Health of River Systems
… Database provides details on river microbes in 90% of US continental … to the community level. The Impact Rivers are transport systems, and their health is heavily reliant on the energy and … several access points for these datasets. As part of a larger microbiome data integration hub, these datasets are …
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Anuvia taps JGI for expertise to pinpoint products from beneficial soil microbes
… The practices that support agriculture – such as efficiently using dwindling water resources and restoring and maintaining healthy soils – are at the heart of … to these challenges.  DOE’s Office of Science is the largest supporter of basic research in the physical sciences …
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JGI announces first round of 2023 New Investigator awardees
… The JGI is eager to work and share our tools with a widening circle of researchers. The JGI is eager … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy … to these challenges.  DOE’s Office of Science is the largest supporter of basic research in the physical sciences …
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Kjiersten Fagnan
… Kjiersten Fagnan began working with JGI in 2012 as a NERSC bioinformatics computing consultant, after completing a petascale … Kjiersten Fagnan is the JGI's Chief Informatics Officer. Click to learn more about how the JGI … including the JGI portals, and our broader data ecosystem. …
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