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A data analysis and coordination center for the human microbiome project
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Earth BioGenome Project: Sequencing life for the future of life
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A Social Science Experience
… 2017 Summer Interns Share Highlights of their time at the JGI …
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JGI Early Career Researchers Featured in mSystems Special Issue
In a special issue of mSystems , out May 14, 2019, JGI researchers are among the authors who offer perspectives on what the next five … Eloe-Fadrosh outline more targeted approaches to reconstruct individual microbes in an environmental sample beyond …
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… data from the 1000 Fungal Genomes project to form new connections between fungal guilds, genes and function. If a … bases — a terabase — of soil RNA for this project, and produced the reference genomes that allowed for mapping these … of these varied biomes; the forests share only about 20% of their fungal species. To make useful comparisons, the …
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Data Ecosystem
… expand access to integrated data, improve tools and infrastructure as well as ensure cohesive data standards, the JGI … specifically optimized for high-performance computing environments. … KBase is a critical partner in enabling systems … are authoritative providers of data or capabilities in their respective subject area. … The NMDC is tackling …
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The Joint Genome Institute's synthetic biology internal review process
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DOE JGI Metagenome Workflow
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Nigel Mouncey
… private sector, as well as research expertise in secondary metabolites and synthetic biology. Dr. Mouncey has a … interest in microbial genetics that started with his education and carried forward into his roles as a senior … Discovery. mBio. 12:e03432-20 Wood-Charlson EM et al. 2020. The National Microbiome Data Collaborative: enabling …
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IMG/M-HMP: A Metagenome Comparative Analysis System for the Human Microbiome Project
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Igor Grigoriev
Institute in 2003, following his postdoctoral training at UC Berkeley and work in the pharmaceutical industry. He … Institute, a Senior Scientist at Lawrence Berkeley National Laboratory, and an Adjunct Professor of Plant and … Natl Acad Sci U S A. 118(18):e2019855118. Miyauchi et al (2020) Large-scale genome sequencing of mycorrhizal fungi …
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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
Congratulations to US Department of Energy (DOE) Joint Genome Institute (JGI) staff scientist Simon Roux , who was recently selected as the 2025 recipient of the Microbiome Data Prize by the American … Cited Researchers list, and has appeared on the list since 2020. …
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