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… (IGB) seen above is home to the DOE Joint Genome Institute (JGI). Researchers from the DOE Systems Biology Knowledgebase (KBase), the National Microbiome Data Collaborative (NMDC), and Berkeley Lab … an increased number of users with a record output of products, making data easier to access and use, and by investing …

… Platform capabilities support researchers exploring how to convert sequence into functional assessments. This is done by … chromosomes for bioenergy, nutrient cycling and bioproduct applications.  The team has three subgroups: Synthetic … assembly and analysis Overview of biodesign products The JGI Biodesign platform enables users to validate hypotheses …

… in 2010. As the Deputy for Science Programs, he focuses on the development and implementation of strategic … computational and experimental sequence-based methods for elucidating the gene regulatory landscape of vertebrate … School of Natural Sciences at the University of California, Merced. Dr. Visel also served as JGI Interim Director from …

… high-performance computing resources, an upcoming hackathon led by the Oak Ridge Leadership Computing Facility … opportunity to either jumpstart acceleration or optimize their code on GPUs. While the  OLCF is organizing nearly a … of on simulation codes. “JGI is one of the largest producers of environmental genomics data and has a strong …

… data from the 1000 Fungal Genomes project to form new connections between fungal guilds, genes and function. If a … bases — a terabase — of soil RNA for this project, and produced the reference genomes that allowed for mapping these … of these varied biomes; the forests share only about 20% of their fungal species. To make useful comparisons, the …

… Coleman and Hugh Cross; [Below] Zac Freedman, Martin Jonikas, Lotus Lofgren, Fumito Maruyama, Lauren Stadler, … the National Microbiome Data Collaborative (NMDC) to produce open metagenomics data. Taking the JGI’s call for large-scale projects at their word, the research consortium aims to generate over a …

… Notes from the Summer 2018 Biotech Partners Interns from Antioch High School. Though a partnership with Biotech Partners, a nonprofit that provides underserved youth in the Bay Area … experiences that increase participation in higher education and access to fulfilling science careers, JGI hosted …

… enabled by the JGI DNA Synthesis Science Program. Fashioning DNA outside a cell is key to interrogating what genes … which started in 2012, and what they’ve discovered through their collaborations. One review article in the collection, … plants. To better pinpoint the biosynthetic routes that produce terpenes, the JGI synthesized several of the underlying …

… The Plant and Animal Genome XXVII Conference (PAG) takes place January 12-16, 2019, in San … Calif. Representatives from the DOE Joint Genome Institute (JGI) and the  DOE Systems Biology Knowledgebase (KBase) will … systems that make use of these resources will present on their work. BER Plant Genomic Science Workshop Agenda: 6:20 …