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Engagement Webinar: Utilizing long-read sequencing for metagenomics and DNA modification detection
… of microbial, fungal, and plant research projects.  More recently, these long-reads have been applied to DNA … (PacBio) metagenomes can be included, which do not count toward the 1Tb cap. PacBio metagenomes are currently … it’s not necessary to polish with both, and generally it’s more efficient just to make a single library tape. If you do …
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Viruses Reprogram Cells into Different Virocells
… bacteria’s central carbon and energy metabolism, to obtain more nutrients from the environment. Demonstrating that the … and their impacts on the ecosystems can vary is a step toward developing more efficient predictive ecosystems models. Next, the researchers are working towards better understanding how nutrient availability, or …
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Mapping the Earth’s Hidden Fungal Kingdom
… genomics resource platform, reveals a stark imbalance. More recently evolved fungi within Dikarya, which include … this data for researchers worldwide. As the JGI scales toward 10,000 annotated genomes, this infrastructure … and AI we should better understand fungal biology. Moving toward 10,000 fungal genomes and beyond will yield novel …
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Boosting Small Molecule Production in Super “Soup”
… National Laboratory, indicates metabolic pathways could be more productive outside the cell environment, which would be … enhanced their ability to redirect the carbon in the cells toward particular pathways. In this case, towards BDO and away from ethanol, an undesired product of …
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New and Improved: Eucalyptus Reference is Now Accessible
… meaning the genome is reconstructed in much larger and more complete segments. This allows for more accurate and detailed comparative genomic analyses.   … the eucalyptus species. The researchers are already working toward a eucalyptus pangenome to better understand the …
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Plant Microbial Interactions Group
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Trent Northen
… Science Program Head at the JGI. Click to learn more about the program's areas of focus, major initiatives and more.  … Novak, V, et al. Reproducible growth of Brachypodium in EcoFAB 2.0 reveals … (2019) doi: 10.1038/s41592-019-0465-0. Couradeau E et al. Probing the active fraction of soil microbiomes using …
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Iron-rich Microbial Mats’ Main Players: Marsarchaeota
… applications. Molecular biology has benefited from heat-stable enzymes derived from thermophiles, stabilizing the …
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JGI Workshops at PAG
… current and ongoing developments at the JGI and KBase toward integrative biology and hear from researchers who are …
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VEGA Symposium
… and functionally explore viral genetic diversity toward innovative biotechnological and industrial …
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From Competition to Cooperation
… the first mycorrhizal genome sequence generated by the JGI more than a decade ago. Having these datasets will assist researchers in moving toward functional genomics studies to learn more about the inner workings of plant-host and …
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Boosting Small Molecule Production in Super “Soup”
… National Laboratory, indicates metabolic pathways could be more productive outside the cell environment, which would be … enhanced their ability to redirect the carbon in the cells toward particular pathways. In this case, towards BDO and away from ethanol, an undesired product of …
Learn more

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