Search

… at Lawrence Berkeley National Laboratory, contributed metagenomic sequencing to the study as well as  genome … on the JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) portal. The study,  published in the  Microbiome … funded by the US-National Science Foundation grants OCE-0728391, OCE-0937404, OCE-1558795 to A-L.R, and OCE-2049478 …

… Congratulations to the 2021 Highly Cited Researchers at the JGI! They are among those … aspects of the Integrated Microbial Genomes & Microbiomes (IMG/M) Nikos Kyrpides was part of an international research …

… Waldo will have all of these features. As described July 22, 2019, in  Nature Microbiology , a team led by scientists … use to conduct a similar type of search in microbial and metagenomic databases. In this case, the machine “learned” to … search tool combed through more than 70,000 microbial and metagenome datasets, ultimately identifying more than 10,000 …

… by combining a study of microbial communities (metagenomics) and a chemical labelling approach. The Impact … researchers surveyed publicly available data in the JGI’s  IMG/M database , information the Probst lab used to search … do so, they compared samples collected from an aquifer in 2012 and 2018 against a biofilm sample collected in 2018. …

… including the Integrated Microbial Genomes and Microbiomes (IMG/M) system for microbial and metagenome datasets, MycoCosm for comparative analysis of …

… On February 8, 2024, the DOE Joint Genome Institute and the Environmental … (APS) at Argonne National Laboratory when applying to the FY2024 EMSL-JGI FICUS collaborative proposal call . Letters of … from all around the world and at different career level stages. We work with start-ups and mature companies, as long …

… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of … , mining the Integrated Microbial Genomics & Microbiomes (IMG/M) system’s immense collection of publicly accessible metagenomic datasets from a wide variety of ecosystems around …

… of the latest call , a total of 70 graduate students from 52 universities were selected to carry out part of their thesis research at 12 host national laboratories or facilities between 3-12 … plans to work with JGI virus researchers and harness the IMG/VR database. “The SCGSR award will further my goal of …

… plants did you all look at? Avinash: We started off with 12 plants, which are JGI Flagship Plants, mostly related to … we are looking at 18 different species, which included over 2000 RNA Seq libraries. As I previously mentioned, this is … to standardize the experimental protocols. Then, in 2020, seven more groups joined the project to contribute to …

… in this publication during her summer internship in 2018. She selected one of the projects posted by JGI fungal … a virtual four-day data carpentry workshop for the incoming 2021 JGI-UC Merced interns to help familiarize incoming …

… the discovery of more than 30,000 DGRs in this analysis, a 20-fold increase over what was previously known, throws open … sampled all at once from the same environment, called metagenomes. Why? Simon Roux, who led the research team and is … of the U.S. Department of Energy under contract no. DE-AC02-05CH11231. This research used resources of the National …

… This year’s list features 6,900 researchers working in 21 fields.  Congratulations to the  2022 Highly Cited … sped up the study of giant viruses.  Kyrpides and the JGI’s IMG/M Data Portal were instrumental to  a study that looked … He and  Tringe were also involved in a study that applied metagenomic capabilities to  studying phytoplankton …