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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … these gaps of knowledge. In a study published November 11, 2022, in Cell Genomics , the team focused on Actinobacteria … the JGI has pioneered, including single-cell genomics and metagenomics. The GEBA initiative has also utilized a very …
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JGI@25: The Little Alga That Could
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements … our collaborations and capabilities to enable great science that will help solve energy and environmental … the full genome was sequenced and published in the journal Science . At the time, the project was co-led by Daniel …
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Matt Blow
… genomes. When he joined the JGI, he worked as a project scientist and then as a research scientist on projects to develop functional genomic … Cells bioRxiv , 2024.01. 30.577819 2. Dicenzo et al. 2022. DNA Methylation in  Ensifer Species during Free-Living …
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Jane Grimwood Named HudsonAlpha Genomics Chair
… viridis ). The team of researchers at the Danforth Plant Science Center (Danforth Center), HudsonAlpha and the JGI …
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Model Fern Reveals Insight into DNA Thievery in Ferns
Open Green Genomes hits milestone with C. richardii The Science Fern genomes are huge, and incredibly complex — … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … Green Genome Initiative in 2018 as part of its Community Science Program. The OGG has set out to generate …
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
… page of that book. Published online September 28, 2022, in Cell , a team led by researchers at Tel Aviv … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … store their genetic information in RNA without a DNA stage. “I would argue RNA viruses globally are even less …
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SPRUCE-ing Up Science
… expertise, a combination of biology and computer science, to reveal clues about how microbial and bacteria … and UC Merced faculty focused on bioinformatics was coalescing. Lawrence applied for and was accepted as one of the … Sphagnum peatmoss resilience to warming . New Phytol. 2022 Jun;234(6):2111-2125. doi: 10.1111/nph.18072.   Byline: …
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Engagement Webinar: Accessing NEON’s Environmental Sample Archives, Applying JGI & EMSL Omics Tools
… the  “Facilities Integrating Collaborations for User Science” (FICUS) call between the JGI and the  Environmental Molecular Sciences Laboratory (EMSL) , successful applicants can also … faculty member as PI? A(nswer: The FICUS program is open to scientists at international institutes.  Applicants do not …
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Ancient Algae Reveal Secrets of Plant Evolution
… helped plants conquer land over 600 million years ago. The Science By studying the genes of land plants’ closest algal relative,  Zygnematophyceae , scientists have enhanced our understanding of how early … drive a strong bioeconomy. Summary Through the Community Science Program of the U.S. Department of Energy (DOE) Joint …
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DOE JGI Interns Share Their Summer Experiences
DOE JGI’s efforts to promote diversity and inclusion in the sciences, among the interns were two undergraduate students … . CAMP is a statewide initiative funded by the National Science Foundation (NSF) and supports underrepresented minorities in science, technology, engineering and math (STEM) fields. …
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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
With a new methodology, scientists are now getting more complete genomic results … scientists usually employ two different methods; shotgun metagenomic sequencing and single-cell sequencing. For years, … genomes from microorganisms are shotgun (group) metagenomic sequencing and single-cell (individual) …
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Applying Viral Genomics Expertise to Understanding the Human Virome
… microbes by at least another order of magnitude. For years, scientists at the DOE Joint Genome Institute, a DOE Office … CheckV , which assesses the quality and completeness of metagenome-assembled viral genomes ( Nature Biotechnology , … learning framework to maximize host prediction for metagenome-derived viruses of archaea and bacteria ( PLoS Biol …
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