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… datasets in JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) data suite—which includes  IMG/VR (for Virus)—for the virophage marker gene MCP, they were able … including over 28,000 unique MCP sequences.  Further analysis led to the identification of 328 “high quality” …

… attracted the attention of many mycologists with the two publications of the kingdom-wide, multi-gene phylogeny of … question, despite of their well-designed sampling and analysis of their data at the time. Following the … genome and transcriptome data were generated, bioinformatic tools for binning metagenome data involved with mainly …

… doctoral research in synthetic biology and microfluidics at the University of California, San Diego. As the Sequencing Technology … technologies, integrating automated liquid handling and bioinformatics pipelines to transition bench-scale methods … of California, San Diego Postdoctoral training in bioinformatics, Lawrence Berkeley National Lab …

… genomes, researchers were able to carry out a broader analysis than had ever been done before to look at how multiple forest fungi have independently evolved to … Genomics Initiative (CSP # 305), Metatranscriptomics of Forest Soil Ecosystems project (CSP # 570) and the 1000 …

… available data, GenomeOcean employs artificial intelligence for cutting-edge genomic research — and is capable of … — and primed for integration with artificial intelligence tools.  LLMs aren’t just for understanding the human … (Tb) coassemblies that explore diverse environmental microbiomes. Together, these datasets represent a wide range …

… Neha’s key role is to design, benchmark, and apply bioinformatics software to enable analysis and interpretation of genomic and metagenomic data … through implementation of advanced analysis pipelines and tools as well as development and implementation of …

… metabolites and associated genes are great resources for bioremediation, new agricultural applications or … the OGG. For a long time, C-fern has served as a model for studying ferns and for teaching plant biology. It is typical … to its gene hoarding and those long genes. And gene family analysis showed that genes directing development of …

… Mr. Schmutz’s involvement with the JGI dates back to 1997, when he was working for the Stanford Human Genome Center, now the HudsonAlpha … de novo plant assembly and the post-genome computational analysis at HudsonAlpha. … Jeremy Schmutz is the Plant Science Program Head at the JGI. Click to learn more about the program's areas of …