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How Maize Makes An Antibiotic Cocktail
Maize produces a family of compounds that protects it against infections — using … enzymes. The Science Maize ( Zea mays ) produces a plethora of antibiotics called zealexins. Even though scientists have … many different products out, instead of the more typical, one enzyme, one product. At each step, the zealexin pathway …
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A Grass Model to Help Improve Giant Miscanthus
Miscanthus  sequence offers insights into benefits of polyploidy and perenniality. The Science A reference … plants are diploids with two copies of each chromosome, one inherited from each parent. Some plants, known as …
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Virus-Microbe Interactions of Mud Island Mangroves
… a graduate student in Brett Baker’s lab at the University of Texas at Austin, will defend his dissertation. Some of his research was conducted at the JGI through the DOE … the opportunity to pursue part of their thesis research at one of the DOE national laboratories or national user …
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From Competition to Cooperation
Tracking evolution of symbiotic lifestyles across multiple fungal lineages. The … able to carry out a broader analysis than had ever been done before to look at how multiple forest fungi have … role in soil carbon storage. Summary There are three types of fungal saprotrophs in the forest. White rot can break …
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JGI Scientists Pen Genome Watch Articles
… more to come in 2020. Researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley … Emiley Eloe-Fadrosh ,  Metagenome Program lead, shone a spotlight on  ammonia oxidizing archaea and what we’re …
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Access to Rock Star Scientists
… their work delivered during the 5th anniversary celebration of the internship program. Candace Cole, UC Merced JGI Mentors : Ben Cole & Axel Visel, Genomics of Plant-Microbial Interactions “The summer internship has … My favorite thing is the mentorship provided by JGI. Everyone at JGI is so nice and helpful.”     Mo Kaze, UC Merced …
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Applying Viral Genomics Expertise to Understanding the Human Virome
… viruses outnumber the microbes by at least another order of magnitude. For years, scientists at the DOE Joint Genome Institute, a DOE Office of Science user facility located at Lawrence Berkeley … , head of the JGI’s  Microbiome Data Science , leads one project with JGI colleagues Antonio Camargo and Simon …
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
… school scientists. The Florida Everglades evokes images of fanboats skimming over swamps, while alligators peer … his high school juniors a research project experience and one of his email inquiries, sent through JGI’s  Integrated … scientific journal. It was gratifying to see the empowerment displayed across each of their faces.” …
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… function. If a tree falls in the forest — whether or not anyone registers the sound — one thing is for sure: there are lots of fungi around. Within a forest’s soil, hundreds of species decompose debris, mobilize nutrients from that …
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Bacteria and Fungi Divvy Up the Work in Forest Floor
… analyzing the enzymes present in the complex organic matrix of the forest floor, a team of researchers have found that there is a striking division … near the roots. But the deeper down and away from the roots one goes, the more bacteria show up. The data underscore …
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JGI Earth Month: The Unusual Metabolism That Helps Plants Withstand Drought
In April 2020, we mark both the 50th celebration of Earth Day on April 22, and DNA Day on April 25. As both …   ALISON:  Hey! I’m Alison Takemura at the US Department of Energy Joint Genome Institute, or JGI.  Two special days … to deal with hot and dry conditions could help us to one day develop plants that are more drought-tolerant. These …
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JGI@25: The Little Alga That Could
In honor of the JGI's 25th anniversary in 2022, we have revisited a … (affectionately known as “Chlamy” to those who study it) a powerful reference organism for studying photosynthesis and … JGI shows that those sequences have been cited in almost one-fourth (23.8%) of publications focused on that specific …
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