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… Norway spruce trees, and microbial activity teems beneath your feet. Both bacteria and fungi have genes that can break … Baldrian’s team was investigating. So, to be able to identify proteins, the team compiled DNA sequences (metagenomes) … the Facilities Integrating Collaborations for User Science (FICUS) initiative, which allows researchers to integrate the …

… analysis of microbial, fungal, and plant research projects.  More recently, these long-reads have been applied … deeply are metagenomes sequenced? A:  For the next call ( CSP New Investigator ), up to 4 long-reads (PacBio) … PacBio reads (i.e., reads with very low error rate), so our pipeline performs long-reads-only assemblies and not …

… generate from carbon dioxide they take in. In this way, encouraging this symbiosis could improve the way soils store … “Those are great candidates for genetic engineering. Our hope is that the community at large will follow that … working to address some of the most pressing challenges of our time. For more information, please visit  …

… genomic information into biological function. Through our CSP Functional Genomics call , we look for projects that will leverage the JGI’s DNA synthesis and …

… which has been applied to a wide range of JGI user science projects spanning bacteria, fungi, and plants. His team is … DNA affinity purification sequencing (DAP-seq) to identify in vitro binding sites of potential Novosphingobium … DSM12444 transcription factors." Microbiology Resource Announcements 14, no. 8 (2025): e00260-25. Cassol, …

… and led the Quantitative Plant Science Initiative (2017-2022), a BER Science Focus Area (SFA).  … Handling Editor, Journal Experimental Botany, 2022 – present University of … to co-functionality: Eukaryotic gene neighborhoods as a resource for function discovery. Mol Biol Evol  38(2): 650-662. …

… these datasets, researchers made a pan-genome containing four  B. hybridum  genomes and many  B. distachyon genomes. … working to address some of the most pressing challenges of our time. For more information, please visit  …

… driving force behind the development of numerous genomic resources that fostered the widespread adoption of Brachypodium … is focused on developing plant functional genomic resources (e.g. sequenced mutant collections, transformation … epigenetic analysis techniques) and utilizing these resources to understand genome organization and regulation, …

… contributing to bioremediation efforts for decades. Identifying resident microbes that can help bioremediate toxic … populations rely heavily on groundwater as their only source of clean drinking water. Over 90% of the PCE in the … ago. The NRAP site is still being monitored and the team plans to continue collecting data to understand the ERD …

… From our partners …

… be the first publicly available, river-focused microbial resource that provides information at multiple scales from … of river health diagnostic systems to monitor for and identify land use or water quality changes. Summary Rivers are key … can successfully partner with DOE user facilities and resources on such large-scale multi-omic data efforts, but also …