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An Integrated Dataset to Understand Ecosystem Interaction
… tree and soil dataset for understanding the dynamic relationship between poplar trees and their microbial partners. … they are, a recent data set  outlined in  Scientific Data connects molecular features to large ecosystem-level … how different elements of the ecosystem interact and respond to changes in the environment. The Impact Dubbed “the” …
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JGI@25: Mapping Switchgrass Traits with Common Gardens
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and capabilities to enable great science that will help … P. virgatum on Phytozome …
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Interdisciplinary delegation from the University of Duisburg-Essen explores collaborative opportunities with Lawrence Berkeley National Laboratory
… A two-day kick-off meeting held at Lawrence Berkeley National Laboratory (Berkeley Lab) marked the visit of an … The meeting involved key representatives from the ACTIVE SITES Research Center (ACSI), the Centre for Water and … Greg Hura, Jan Kern, Nikos Kyrpides, Trent Northen, Robert Kostecki, Susan Tsutakawa, Junko Yano, and Petrus …
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Innovative Technology Improves Our Understanding of Bacterial Cell Signaling
… Newly developed chemiluminescent biosensors shed light on how bacteria function and colonize diverse environments. The Science Cyclic … team created functional biosensors by finding an insertion site for the E. coli cyclic di-GMP binding protein, Ec YcgR, … The work conducted by the U.S. Department of Energy Joint Genome …
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Nigel Mouncey
… private sector, as well as research expertise in secondary metabolites and synthetic biology. Dr. Mouncey has a long-standing interest in microbial genetics that started with his education and carried forward into his roles as a senior research … Nigel Mouncey is the Secondary Metabolites Program head as well as our JGI Director. …
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JGI announces 2024 Functional Genomics awardees
… year, the JGI accepts proposals for state-of-the-art functional genomics research from reseachers who translate genomic information into biological function. Through our CSP Functional Genomics call , we look for …
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2024 Progress Report
… from the DOE Systems Biology Knowledgebase (KBase), the National Microbiome Data Collaborative (NMDC), and Berkeley Lab Biosciences Area are also co-located in the IGB. Vision  Lead genomic innovation for a sustainable bioeconomy. Mission  As a U.S. … of primary users — 2,456 — had active proposals with us, along with more than 15,000 secondary users who made use of …
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Bacteria and Fungi Divvy Up the Work in Forest Floor
… Bacterial enzymes play second fiddle to those from fungi when it comes to breaking … of researchers have found that there is a striking division of labor between the two groups. Fungi are much more … to dig into a forest floor ecosystem to discover what carbon- and nitrogen-metabolizing enzymes are abundant, and to …
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Designer DNA: JGI Helps Users Blaze New Biosynthetic Pathways
… enabled by the JGI DNA Synthesis Science Program. Fashioning DNA outside a cell is key to interrogating what genes do, how they work, and applying them to environmental and energy challenges. But not all scientists have … of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab), comes in. The JGI is …
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First Monoploid Reference Sequence of Sugarcane
… Most species are diploids and have two sets of chromosomes, one from each parent. In contrast, many crops have multiple sets of chromosomes (they … and maize, sugarcane can grow on nutrient-poorer soils and does not need to be planted annually. The modern sugarcane …
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JGI@25: From Life at the Extremes to Editing Genomes
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and capabilities to enable great science that will help … On Jennifer Doudna's Nobel Prize …
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JGI@25: A Single Cell, Myriad Microbial Discoveries
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and capabilities to enable great science that will help …
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