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Marine Microbe Contains Multitudes
… Pacific Subtropical Gyre, microbes tend to stay localized at different depths. But SAR324 can be found throughout the … at the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Science Program . The metagenomes were also processed using the JGI-developed software suite, BBTools , and …
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Understanding Wildfire Recovery, Starting in Soil
… A metagenomic look at the soil microbes present a year after a wildfire. The … published in Nature Microbiology , went a step further, using both DNA and messenger RNA (mRNA) sequencing to … and growth.  This study builds on the pyrophilous fungi the JGI has previously sequenced , and provides a powerful …
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Mindfully Moving JGI
… JGI is in the process of shifting its operations from Walnut Creek to the heart of the Berkeley Lab … Turner. How extensive? Consider that the process of moving 250 people and their equipment from 4 single-story buildings … and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and …
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Bacteria and Fungi Divvy Up the Work in Forest Floor
… down tough plant fibers. The Science Walk in a temperate forest filled with Norway spruce trees, and microbial … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … role that fungi can’t fulfill by fixing nitrogen and using it as an energy source. No fungi are known to be able …
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JGI Scientists Pen Genome Watch Articles
… Tanja Woyke and other JGI researchers made their debut writing for the Nature Reviews Microbiology column last year — and there’s … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and …
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Here, There and Everywhere: Large and Giant Viruses Abound Globally
… JGI-led team significantly expands the global diversity of … and giant viruses. While the microbes in a single drop of water could outnumber a small city’s population, the number … viruses from environmental sequences across the globe, then using these sequences to make inferences about the …
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Eelgrass Proves to Be Much Younger Than We Thought
… about 2.5 million years less than previously believed.  The Science Eelgrass, one of the most abundant plants in the ocean, originated in Japan before spreading around the globe. Now, … ago. The study shows that figure is likely closer to a mere 250,000 years — with many key colonization events in the …
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Building on basic metagenomics with complementary technologies
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JGI on the 2021 Highly Cited Researchers List
… Congratulations to the 2021 Highly Cited Researchers at the JGI! … was part of a long-term multi-institutional research team that combined field data with a reference switchgrass …
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Introducing New Members of the JGI User Executive Committee
… The JGI welcomes three new members to the JGI User Executive Committee (UEC) : Roland Hatzenpichler of Montana State University, Teresa Pawlowska …
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Examples: Successful LOIs & Submissions
… See below for examples of successful Letters of Intent to our Community Science Program Large-Scale Call, as well as successful submissions to our CSP New Investigator, CSP Functional Genomics, and Facilities Integrating … RNA-seq and metabolomic insights in lignin biosynthetic pathway edited populus …
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Natural Prodcast
… Natural Prodcast is a “fireside chat”-style podcast about natural products and the science and scientists of secondary metabolism. Natural … to medicine, the environment, and human health. As the JGI acts on its goals in — and builds out its capabilities …
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