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… When the JGI Data Portal (https://data.jgi.doe.gov/) launched last year, it was only accessible through … common set of metadata. For Steve Wilson, JGI’s Systems Engineering group lead, the Data Portal reflects a structural … limited to: Public data: datasets associated with completed projects that are eligible for public release, have …

… To provide broad plant genomic capabilities, the DOE Joint Genome Institute works in partnership with the … Centralized databases with large-scale transcriptome projects such as Expression Atlas and PPRD could help with … keep updating the Gene Atlas with curated datasets from CSP projects and aim to improve plant gene function …

… human-centered, agile collaboration between the JGI and the information technology company Truss has resulted in the JGI Data Portal , a pilot download experience … databases and tools,” noted  Kjiersten Fagnan , JGI’s Chief Informatics Officer. JGI’s Portals, including Phytozome , …

… Biology is currently experiencing a revolution brought on by rapid developments in genomics and other omics technologies.  The exponential growth of DNA sequencing data, coupled with recent computational technology … of genomes from uncultivated microbes (Nature 2019). Other projects in the group include the sequencing and comparative …

… Since 2012, Mr. Shahab has led the development of an integrated platform for tracking JGI's sequencing projects and data warehousing. This platform streamlines … and enables efficient analysis and reporting of sequencing projects and their status. Mr. Shahab has extensive …

… New genomes highlight the diversity of white rot fungi in the genus Lentinula   The Science Shiitake mushrooms get … sequencing were enabled by the Community Science Program (CSP) at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science …

…  Learn about meetings the JGI is hosting:   … New Lineages of Life (NeLLi) Symposium … The JGI is represented at conferences year round; find out where our researchers will be presenting next. Go here to learn about upcoming user-focused …

… – Jack Gilbert, Ashley Shade, and Jason Stajich! They join six other JGI users already serving on the UEC – go here to view the full roster of members. … Each of the researchers had their own reasons for wishing to serve on the UEC. For microbial ecologist Gilbert at …

…   Later this year, Ian Rambo, a graduate student in Brett Baker’s lab at the University of Texas at Austin, … Some of his research was conducted at the JGI through the DOE Office of Science Graduate Student Research (SCGSR) … worked with the JGI through a Community Science Program (CSP) proposal, and Rambo’s research builds on that. “The …

… Chloroplast mimic a platform to capture and utilize carbon in a synthetic fixation cycle. The Science Chloroplasts are … was enabled in part through the Community Science Program (CSP) of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science …

… Laboratory (Berkeley Lab) hosted a pitch event promoting fully-supported summer research collaborations through the U.S. Department of Energy (DOE)’s Visiting Faculty Program (VFP) . The VFP is a summer … for the summer term (May through August) and selected projects will receive stipend and travel expenses, both for …

… s ditched their flagella and other traits when migrating back to the ocean. The Science Scientists have discovered flagella in an unexpected place: hot spring-dwelling bacteria from … by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility at Lawrence Berkeley …