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… data modeling, and biological data management. She was one of the co-authors and key developers of the Object-Protocol Model (OPM) data management tools for scientific applications developed at Berkeley Lab. … for the data management infrastructure of the Integrated Microbial Genomes (IMG) family of systems. Before joining …

National Laboratory where he focused on functional genomics of phototrophs. Through this and post-doctoral positions at University of Florida and UCLA he has worked with a wide range of … Wales, Cardiff, Genetics Ph.D. – University of Cambridge., Microbial molecular biology Post-doctoral positions  – …

See below for examples of successful Letters of Intent to our Community Science Program Large-Scale Call, … genetic microdiversity or core metabolic flexibility? … Microbial contributions to soil carbon storage during …

JGI researchers lend expertise to develop tools and data hub for NIH program. While the microbes in, … viruses outnumber the microbes by at least another order of magnitude. For years, scientists at the DOE Joint Genome … in developing and maintaining the JGI’s  Integrated Microbial Genomics and Microbiomes (IMG/M) system. The …

… issue of Nature Microbiology , they mined the Integrated Microbial Genomes & Microbiomes (IMG/M) database maintained … datasets from a variety of environments, as well as tools for analysis. “There is evidence that methanogenesis … two metabolic pathways “Up to this point, most phylogenomic trees have relied on only one korarchaeotal representative,” …

Microbial communities living near hydrothermal deep-sea … get any sunlight, and yet they still support a unique array of microorganisms adapted to living in extreme conditions. … This means they hold clues for understanding how life thrives in extreme environments. They also produce a …

June 24-28: Module 2/Microbial Genomics & Metagenomics Workshop The workshop is addressed to students and professionals of biology, biomedical research, the health … fields who are interested in learning and sharing concepts, tools and research results in genomics, metagenomics and the …

… archaea are estimated to produce 500 million tons of methane a year, which is over half the total global … recent studies now suggest the gene cluster predates this microbial group. Recently published in the Proceedings of … methanogenesis occurring in the entire archaeal domain of life.” … The U.S. Department of Energy Joint Genome …

… your plant genomics research. Click here to download a list of talks relevant to JGI science at PAG XXVII. On January … genomic sequence information to BER-funded activities of plant systems that make use of these resources will … in the Moss Ceratodon 7:09 PM Bioinformatic Approach to Discovering Promoters Regulating Poplar Drought Response …

… remembering to document his code. At JGI, he develops tools for viral discovery and analysis, with a particular … viruses – though he'll take a look at anything related to microbial parasites. When not debugging pipelines, he can be … just "spicy messenger RNA", and that somewhere in the mess of genetic sequences lurks the next cool virus – if only our …

By studying the structure and function of a cyanobacterial protein, researchers have new insights … domain of unknown function.  First, they looked across the tree of life, doing a very complex CTRL+F search for this domain, …

Large-scale comparative analysis leads to identification of biosynthetic gene clusters for novel secondary … have uncovered genomes for just a small fraction of Earth’s microbial diversity. Because most microbes cannot be … genomes available at that time. “Looking across the tree of life, it’s striking how many uncultivated lineages …