Search

… resequencing, transcriptome, epigenome and other functional genomics datasets generated by JGI user science projects. … … Nature 557:503-509. Blow et al 2016. The Epigenomic Landscape of Prokaryotes. PLoS Genet 122:e1005854. Nord Et Al. … Editorial board member for Scientific Reports … Education … Selected Publications … Awards and Service …

… 2017 Summer Interns Share Highlights of their time at the JGI …

… genomic coverage. Experts in cultivation and environmental genomics will work together to develop recommendations for … and single-cell sequence data have provided a means to access novel microbial lineages, leading to a new … Nevada, Las Vegas Duane Moser , Desert Research Institute Nicole Pietrasiak , University of Nevada, Las Vegas Ranjani …

… work results from a collaboration involving more than 200 scientists, researchers at the U.S. Department of Energy … called metagenome binning, we were able to reconstruct thousands of metagenome-assembled genomes (MAGs) … these samples, many of which come from unique, difficult to access environments, and invited these researchers to be …

… another user facility at Berkeley Lab. geNomad is now accessible through the National Microbiome Data … can affect a microbe’s ability to cycle nutrients or produce new chemicals. They can also affect ecosystems by … genomics of MGEs and their evolution at the cellular level, scientists can better understand ecosystem-wide processes. …

… new bioinformatics solutions to support JGI in adopting new genomics technologies, scaling up genomics analysis to … of computational biologists, bioinformaticians, computer scientists and biostatisticians. Through collaborations with … MetaBAT , an automatic metagenome binning software … Education … Selected Publications … Software …

… the continental United States. They also provided multiple access points to the information. The team harnessed a … turn affecting environmental and human health, energy production and agriculture. Understanding the compositions of … Science Program and the University of Colorado Anschutz’s Genomics Shared Resource. The work (proposal …

… trait for domesticated crops because it leads to reduced harvest yields. Over thousands of years, farmers have … a large-scale genome infrastructure with a reasonably accessible system,” said Schmutz. “Building the pan-genome … their involvement; it’s something we wouldn’t have even started.”  The reference genome of Setaria viridis is …

… base are microscopic, photosynthetic algae. But human-induced climate change , a new study suggests, is displacing … that we all depend on,” said Mock. Mock and the other lead scientists had embarked on the study — a collaboration of … of cold and warm microbial networks, and just how clear and stark the biogeographic boundary is between them. The data …

… sequence data. Dr. Schulz employs multi-omics (metagenomics, metatranscriptomics, single cell genomics and … to find novel functions that may impact microbiome structure and biogeochemical cycles. He provides his expertise … award for exceptional academic achievements (2008) … Education … Selected Publications … Awards and Service …

… or else are interested in participating in the famous JGI-UC Merced internship program. …

Dr. Vogel joined JGI in 2014 to establish a plant functional genomics program. Prior to this, he served as a Research … in an effort to create improved varieties for biomass production. He did his postdoctoral studies at the Carnegie … interact with their microbiomes. In addition, his group conducts comparative genomic research to understand the …