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DOE Metrics
… hours.   FY 2025 DOE Metrics There were 2,627 unique* JGI users in FY2025 , which includes Principal Investigators … new computational developments for improving microbial, metagenomic, or plant genome assemblies. [Download PDF] Q2 – … (LIMS) and temporary shut down of the sequencing production line to accommodate data migration requirements. Q3 actual …
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New Vision, New Mission, New Plan: The JGI’s Next Five Years
… has released its newest 5-Year Strategic Plan: Innovating Genomics to Serve the Changing Planet (download a copy at … .) This plan aligns the DOE Office of Science user facility with broader national efforts to promote and … support of our goals,” said Mouncey. “Creating transparency about our efforts is critical for enabling complementary and …
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Advances and challenges in understanding evolution through genome comparison: meeting report of the European Molecular Biology Organization (EMBO) lecture course “Evolutionary and Comparative Genomics”
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High-Quality Draft Genome Sequence of Desulfovibrio carbinoliphilus FW-101-2B, an Organic Acid-Oxidizing Sulfate-Reducing Bacterium Isolated from Uranium(VI)-Contaminated Groundwater
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A Model System for Perennial Grasses
… drought tolerance. The Science Researchers have developed a genomic model to study drought tolerance in perennial grasses using Panicum hallii (Hall’s panicgrass), by generating two … for developing methods for converting plant biomass into sustainable fuels for cars and jets. By studying a close …
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A More Intuitive Phytozome Interface
… interactive version of the JGI’s plant data portal. On August 6, 2021,  version 12 of Phytozome will be retired, and  … all the data in Phytozome v12, and that most bookmarked v12 links (e.g., to gene reports and organism information pages) … v13. Below are some answers to Frequently Asked Questions about the transition from Phytozome v12 to v13. Why is it …
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Making a Lichen Together
… time, a team analyzes the transcriptomes of a lichen fungus and alga to understand their partnership more clearly. … help researchers better model global carbon and nitrogen cycling. Summary To shed light on lichen, an international team … in the lichen lifestyle. The team’s results appear in  BMC Genomics . To explore the genomes, Armaleo and colleagues …
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UC Merced Interns Reflect on Their JGI Summer Projects
… skills as well as build their network in the field of genomics and scientific research. The topics students worked … wide — from implementing new data visualization tools, to using natural language processing techniques to categorize genetic information. Learn more about their work here in a series of videos produced by JGI …
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Reactive iron, not fungal community, drives organic carbon oxidation potential in floodplain soils
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Chaparral wildfire shifts the functional potential for soil pyrogenic organic matter and nitrogen cycling
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Floodplain nitrifiers harbor the genetic potential for utilizing a wide range of organic nitrogen compounds
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Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities
… from plants, microorganisms, and environmental samples using targeted and untargeted approaches. The webinar … with metabolomics analysis.  Q: Can you give us an idea about the scale of an average study? How many samples are … information for funding by JGI? A: The JGI is not a funding organization. Rather, it makes its sequencing, synthesis, …
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