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… been elected to the User Executive Committee of the Joint Genome Institute, a Department of Energy user facility … worked closely with both the Fungal & Algal Program and the Microbial Program over the past decade in gene regulatory …

… Brachypodium model system traces polyploid genome evolution. Flowering plants abide by the concept, “the more the merrier,” with respect to their genomes. In their base state, they are diploids with two genome copies, one from each parent. Having three or more …

… Program at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … the first time CRISPR-Cas9 had been used to modify a cell’s genome in order to create lysates with altered metabolic … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …

… in fungi. The Science Changing an A, C, T or G in a genome sequence can lead to changes in protein structures … 5mC is an important piece of how they regulate their genomes, but is not well understood in fungi. A team of … or transposons that can move to another location in the genome. Many plant pathogens such as the fungi that …

… climate has earned it a place on the JGI’s Flagship Plant Genome roster. Sorghum has an important feature in common … In 2009, the JGI sequenced and analyzed the first reference genome for Sorghum bicolor . Since then, 2,993 publications, 107 patent applications, and 53 patents have cited that …

… Sorghum genome serves as a reference for the highly complex sugarcane genome . The Science Most species are diploids and have two … in sorghum. Based in part on these positive results, in 2017, JGI approved a CSP proposal from the international team … For the portion of the work conducted by the Joint Genome Institute and the Joint BioEnergy Institute, support …

… Program at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … first time CRISPR-Cas9 had been used to modify a cell’s  genome in order to create lysates with altered metabolic … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …

… Machine learning methods were applied on sequenced fungal genomes to classify gene families. The Science As a proof of … that “taught” a computer how to classify 101 representative genomes of Dothideomycetes, the largest class of fungi, by … to identify data generated in part through the 1000 Fungal Genomes Project, including 55 newly-sequenced species.  The …

… switchgrass is among the JGI Flagship Plants . Since 2007, the JGI has been working on identifying switchgrass genes … crop. In 2018, the JGI had sequenced and assembled the genomes of two varieties of a close relative and model … high-quality reference sequence of the complex switchgrass genome. The reference genome built off more than a decade of …

… decades of technological development, dozens of reference genomes and thousands of resequenced sorghum varieties, a … traits that let this biomass powerhouse thrive. Within its genome, Sorghum bicolor holds keys to drought and flood … on sorghum has focused on producing high-quality reference genomes. By cataloguing a genome sequence for a line of …