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… the plant portal  Phytozome . Now the portal offers a way for users to more easily access public data sets through a common set of metadata. For Steve Wilson, JGI’s Systems Engineering group lead, the … or fungi ( MycoCosm ). “We have made a concerted effort to create a common set of ‘baseline metadata’ across …

… compounds shared by most living creatures for energy, growth and reproduction—most organisms produce a … (SMC) has launched as an interactive public database for the research community. With more than 13 million BGCs … biosynthetic gene clusters and secondary metabolites information from isolate and metagenome data.   The SMC ( …

… participants in an online workshop to harness deep learning for metagenomic data.  Metagenomic data, or DNA sequencing … data gathered from whole samples rather than single cells or isolated strains, is easy to generate, but … to “learn” features. State of the art algorithms can perform astonishing degrees of feature recognition: for …

… microbial mats at Yellowstone offer researchers an analog for studying early Earth conditions. Additionally, … high-temperature (thermophilic) microbes are of interest for their potential use in number of biotechnological … with insights into the evolution of life on Earth. For decades, longtime JGI collaborator Bill Inskeep of …

… The Science After a wildfire burns, recovery begins at the forest floor. Within the soil, a microbiome of bacteria, … and fungi process carbon and nitrogen, paving the way for future plants and trees to grow. However, fire changes … soils. By connecting microbial genes with functions useful for forest recovery, this study sheds light on how microbes …

… provides the only known reference microbiome data sets for the Loxahatchee Refuge,  was published in the journal  Environmental Microbiome . “Before JGI was involved, I was not sure we could even complete … Boca Raton Community High School. “I can’t thank JGI enough for being willing to take a risk on a group of public high …

… by a growing human population and increasing demand for agricultural products.  Sorghum bicolor (L.) Moench is … consortium involving researchers from the University of California (UC), Berkeley, UC Agriculture and Natural Resources … (DOE) also considers this to be a candidate bioenergy crop for its potential production of biomass on marginal lands …

… energy and environmental challenges.   Scanning the California oak woodlands from the air, large swaths of the … can be seen. These plagued patches have become kindling for the inevitable next firestorm. The majestic sentinel … served as just that on a catastrophic scale from Baja California north into Oregon and beyond. The disease is known …

… on April 25.  On March 17, 2020, a shelter-in-place order for all residents took effect in six San Francisco Bay Area … statewide. In this brief captioned video, JGI Chief Informatics Officer Kjiersten Fagnan reflects on the personal … address some of the most pressing challenges of our time. For more information, please visit  …

… from the panel discussion  here . Contact  Robin Johnston for followup questions.     … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy … address some of the most pressing challenges of our time. For more information, please visit  …

… research team included scientists at the University of California (UC), Berkeley, UCLA, UC Davis, Brookhaven National … enabled by the “Facilities Integrating Collaborations for User Science” (FICUS) collaborative science initiative … address some of the most pressing challenges of our time. For more information, please visit  …

… are at the heart of sustaining food and bioenergy security for a steadily growing worldwide population. Anuvia Plant … drive discoveries that will render new economic advantages for farmers concerned with improving sustainable soil … address some of the most pressing challenges of our time. For more information, please visit  …