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… with the seasons. The Science Light-harvesting bacteria (phototrophs) in Antarctica’s Ace Lake defy the norm when it … occupy more space on Earth than any other ecosystem. Therefore, understanding the microbial activity that dominates … researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …

… Methane Metabolism. Methane-producing archaea are estimated to produce 500 million tons of methane a year, which is over … cycle. All methanogenic archaea use one of three pathways for methanogenesis: hydrogen-dependent and CO2-reducing, or … Biohub, and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user …

… Clarivate Analytics, formerly the IP & Science arm of Thomson Reuters, has … in the Methodology section as “those that rank in the top 1% by citations for papers published and cited between … a long-term project to sequence, annotate and analyze the genomes of more than 300 Aspergillus Go here to learn more …

… microbial life and environment, and using metagenomics to study these complex natural systems. Microbial … Matt also supports various CSP and FICUS user projects for the Metagenome Program. …

… Lake Mendota sits right next to the University of Wisconsin, Madison. And Trina McMahon's lab has been sampling the microbes of that lake for over 20 years, to understand how the freshwater … So a few years ago, when they set out to analyze 500 metagenomes, it was the biggest project the JGI had ever put …

… that showcase our collaborations and capabilities to enable great science that will help solve energy and … In 2009, researchers at the JGI and the Bigelow Laboratory for Ocean Sciences described a novel technique to access … year, the JGI team reported the first closed and finished genome derived from an uncultured bacterial single cell – a …

… showed that single cell genomics can add significant value to the other commonly used culture-independent sequencing … approaches including amplicon and metagenomic sequencing. For example, they showed that the composition of the … mobile genetic elements that were missed within paired metagenome assembled genomes (MAGs), and that dominant …

… Dr. Baumgart joined the DOE Joint Genome Institute in 2018, following his doctoral research in synthetic biology and microfluidics at the University of California, San Diego. As the Sequencing Technology … Biology, University of California, San Diego Postdoctoral training in bioinformatics, Lawrence Berkeley National …

… For the first time, a team has comprehensively described … of infecting different host species? Or, do they tend to specialize, infecting just a single host? Another wrinkle … lysogeny, they can insinuate themselves inside the host’s genome, living quietly and replicating with their host …

… about the microbial communities deep underground, and before the pandemic, they took the JGI on a sampling field trip. One of the questions … (FICUS) . Through FICUS, the researchers have tapped into the resources and capabilities of both the JGI and the …

… Nandita is involved in developing new methods to improve genome recovery from single cells and to build sequencing libraries from minimal DNA input without …

… The Plant and Animal Genome XXVII Conference (PAG) takes place January 12-16, … Biology Knowledgebase (KBase) will be at Booth 509. Stop by and chat with representatives from KBase and the JGI … collaborative science opportunities. Learn how to apply for a project with the JGI Community Science Program, and …