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Access to Rock Star Scientists
… JGI Mentors : Ben Cole & Axel Visel, Genomics of Plant-Microbial Interactions “The summer internship has further …     Mo Kaze, UC Merced JGI Mentor : Susannah Tringe, Microbial Systems Group “Everyone here is very kind and …
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Crysten Blaby-Haas
… user capability between the JGI and Molecular Foundry for genome-encoded biomaterial discovery, design, and … and led the Quantitative Plant Science Initiative (2017-2022), a BER Science Focus Area (SFA).  … into the red algae and eukaryotic evolution from the genome of Porphyra umbilicalis (Bangiophyceae, Rhodophyta). …
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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
… from half of the United States. As  reported January 27, 2021 in  Nature , the team led by researchers at the … and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … high-quality reference sequence of the complex switchgrass  genome using samples collected at these gardens. Building …
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Enlarging Windows into Understanding Gene Functions
… four letters represents an organism’s genetic code, or genome, which underlies physical features and functions. … the structures and functions of the genes encoded in the genome sequence is part of the integrative science mission of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …
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Designer DNA: JGI Helps Users Blaze New Biosynthetic Pathways
… This is where the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … is famous for its work sequencing human and environmental genomes. But we now have these DNA synthesis capabilities … the enzyme-encoding constructs, the team studied more than 70 enzymes and how they grab hold of different substrates. …
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Eelgrass Proves to Be Much Younger Than We Thought
… form of another species, so the scientists had to use the genome itself.   Approximately 67 million years ago, the ancestor to eelgrass underwent a whole genome duplication event, doubling all of its chromosomes.  … J.J.S. and J.L.O. from the US Department of Energy Joint Genome Institute Community Sequencing Program (CSP 502951, …
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Polar Phytoplankton Need Zinc to Cope with the Cold
… researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … Science Program (CSP) .  Through this collaboration, in 2017, they published the first genome sequence of a cold-adapted microalga: the diatom … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
… For the first time in several years, the DOE Joint Genome Institute hosted several UC Merced students this past … and Exploring Novel BGC Detection Techniques on Fungal Genomes Video Transcript: Emerald Nash : What I’m working on … that I got to do a project involving over 12,000 fungal genomes was just really, really exciting for me and learning …
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Three Join the JGI User Executive Committee
… Soil Microbiome SFA. She serves as Secretary within the Microbial Ecology Section of the Ecological Society of … biogeochemical cycles in soils and sediments and plant-microbial interactions in crops. He has been a PI or Co-PI …
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A Step Toward Controlling Soybean Rust
… yields by as much as 90 percent. As part of the DOE Joint Genome Institute’s  2016 Community Science Program portfolio … Research (INRA)  proposed sequencing a reference genome for  P. pachyrhizi to develop better strategies to … rust disease. Soybean itself is a  JGI Flagship plant genome , and JGI  published its genome sequence in 2010.     …
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JGI Contributes Nine to 2022 Highly Cited Researchers List
… the JGI is sequencing thousands of bacterial and archaeal genomes from diverse branches of the Tree of Life.  Its … Huntemann, Nikos Kyrpides  and Simon Roux — features 600 genome sequences for Actinobacteria.  Woyke  was also one of … soil health. He also contributed to an update of  the JGI’s Genome OnLine Database (GOLD ) database that also marked the …
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RECAP: Keynote Speakers Talk Innovation at 2022 JGI Annual Meeting
… genes has helped pave the way for the conception of a pangenome. Recordings and recaps of all three keynote talks … Talk Title: CRISPRology — The Science and Applications of  Genome Editing (Virtual) Jennifer Doudna is a professor at … . Susan Wessler , UC Riverside Shaping up conservative genomes Keynote Talk Title: Transposable Element-Mediated …
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