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PhycoCosm Tutorial
… the largest interactive collection of sequenced algal genomes, omics data and comparative analysis tools developed by the Joint Genome Institute (JGI), a US Department of Energy Office of …
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Three Join the JGI User Executive Committee
… lead on PNNL’s Soil Microbiome SFA. She serves as Secretary within the Microbial Ecology Section of the Ecological Society of … biogeochemical cycles in soils and sediments and plant-microbial interactions in crops. He has been a PI or Co-PI …
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Refining the Process of Identifying Algae Biotechnology Candidates
… seems fairly simple: place these algae in a container with access to sunlight, water and carbon dioxide so they … multiple institutions have sequenced and analyzed the genome of an alga that thrives in saltwater (halotolerant) … researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …
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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
… displacing these important cold-water communities of algae with warm-adapted ones, a trend that threatens to … UEA and including the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … point to this fundamental observation of cold and warm microbial networks, and just how clear and stark the …
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JGI@25: The Little Alga That Could
… challenges. Chlamydomonas is a single-celled alga with a unique place in evolutionary history. Retaining … of those shared by both humans and flowering plants). Its genome also contains hundreds of genes uniquely associated … of Chlamydomonas reinhardtii in 2003; then in 2007 the full genome was sequenced and published in the journal Science . …
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Benjamin Cole
… Dr. Cole is interested in studying how plants interact with their environment. Prior to joining the Joint Genome Institute, his focus was primarily on how plants … temperature oscillations throughout the day. At the Joint Genome Institute, Dr. Cole’s research focus has been on …
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Charting Progress toward Professional Goals
… Students can apply for internships and work onsite with an experienced researcher who serves as their mentor. … experiences.  Genomic data scientist Deanna Beatty sat down with interns hosted at the JGI through three different … CalTeach initiative. During their time at the Joint Genome Institute, they interacted with interns from other …
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Tracing the Evolution of Shiitake Mushrooms
… New genomes highlight the diversity of white rot fungi in the … around the world. By complete sequencing of 24 new mushroom genomes, and assembling genomes from 60 existing sequences, this work expands the family tree for Lentinula. Within those samples, this study also tracks the enzymes …
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Nandita Nath
… Nandita is involved in developing new methods to improve genome recovery from single cells and to build sequencing libraries from minimal DNA input without amplification. …
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JGIota: Looking Back at Sequencing for Soybeans
… fields. So in 2010, the JGI helped publish the original genome sequence for the soybean, Glycine max. With a full genome sequence, researchers have been able to look into …
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JGI & KBase at PAG XXVII
… The Plant and Animal Genome XXVII Conference (PAG) takes place January 12-16, … in San Diego, Calif. Representatives from the DOE Joint Genome Institute (JGI) and the  DOE Systems Biology … (KBase) will be at Booth 509. Stop by and chat with representatives from KBase and the JGI about …
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Danielle Goudeau
… combines custom flow cytometric analysis, cell sorting, genome amplification, PCR screening, and 16S sequencing. She …
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