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… plant host health. The Science Researchers compared the genomes of fungi that colonize Arabidopsis thaliana roots with genomes from other plant-associated fungi. Their analysis … was funded by the U.S. Department of Energy (DOE) Joint Genome Institute, a DOE Office of Science User Facility, and …

… Since joining the DOE Joint Genome Institute in 2016, Dr. Otani has been studying … Publications …

… On February 8, 2024, the DOE Joint Genome Institute and the Environmental Molecular Sciences …  Who is eligible to submit a FICUS proposal? A:  We work with people from all around the world and at different … can I maximize my chance for success? A: Reach out ahead of time and talk to somebody at each of the user facilities you …

… In this episode, undergraduates adopt genomes that the JGI sequenced, but never published in the literature. These students analyze the genomes, write reports, and publish first-author papers, … Escobar (California State San Marcos) about how the Adopt-A-Genome project got started. Plus, Kalyani Maitra (California …

… the largest interactive collection of sequenced algal genomes, omics data and comparative analysis tools developed by the Joint Genome Institute (JGI), a US Department of Energy Office of …

… seems fairly simple: place these algae in a container with access to sunlight, water and carbon dioxide so they … multiple institutions have sequenced and analyzed the genome of an alga that thrives in saltwater (halotolerant) … researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …

… T., & Bowen, B. (2015). Analysis of metabolomics datasets with high-performance computing and metabolite atlases. … 59(1), 33–42. Bowen, B., & Northen, T. (2010). Dealing with the unknown: metabolomics and metabolite atlases. … Selected Publications …

… community. The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) has released its newest 5-Year … .) This plan aligns the DOE Office of Science user facility with broader national efforts to promote and stimulate a … the bioeconomy. Functional diversity theme. Reading the genomes of individual organisms or environmental DNA, and …

… of Highly Cited Researchers , which includes 10 affiliated with the JGI . The 2019 list focused on Highly Cited Papers, … a long-term project to sequence, annotate and analyze the genomes of more than 300 Aspergillus Go here to learn more … the minimum amount of information for an uncultivated virus genome, including the source, methods of identification of …

… The Plant and Animal Genome XXVII Conference (PAG) takes place January 12-16, … in San Diego, Calif. Representatives from the DOE Joint Genome Institute (JGI) and the  DOE Systems Biology … (KBase) will be at Booth 509. Stop by and chat with representatives from KBase and the JGI about …

… in the Data Science and Informatics Department at the Joint Genome Institute. His team of engineers and scientists … simulation and coarse-graining of biological complexity with NFsim. Nature Methods 8, 177–183 (2011).  … Selected Publications …

… the Microscale Applications group to operate a similar single-cell genomics pipeline that provides JGI users access to the genomes of uncultured microbes.  His group also handles the … in situ functional activities of specific microbial groups within complex communities.  The Microscale Applications …