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Kjiersten Fagnan began working with JGI in 2012 as a NERSC bioinformatics computing … closely with staff to understand the data-intensive nature of JGI workloads. Dr. Fagnan was appointed CIO of the JGI in … … About the JGI Chief Informatics Officer … Selected Publications … Awards and Honors …

Gene expression in eukaryotes was long held to be monocistronic – that is, a single gene makes messenger … a single protein. Recently reported in the Proceedings of the National Academy of Sciences , a team of researchers … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …

In   April 2020, we mark both the 50th celebration of Earth Day on April 22, and DNA Day on April 25.  On March 17, 2020, a shelter-in-place order for all residents took effect in six San Francisco Bay Area counties. The JGI, … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …

Lab) and other institutions shared their works-in-progress with 86 participants in an online workshop to harness deep learning for metagenomic data.  Metagenomic data, or DNA sequencing data … insights from metagenomic data. In deep learning, a branch of machine learning, data is passed through algorithms …

Creek Featuring a casual, candid, C-level panel discussion with local industry leaders: Arvind Gupta , Managing … Johnston for followup questions.     … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …

Genomes from uncultivated bacteria offers clues to ancestral bacteria’s energy sources. More … postdoctoral fellow Paula Matheus Carnevali was working with a group of metagenome-assembled genomes (MAGs) dubbed … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …

Molecular Biology (CSMB) at Oak Ridge National Laboratory.   On March 2, 2021, the Environmental Molecular … on “Integrated Multi-omics Analyses for the Prediction of Metabolic Flux in. Lignin Conversion”       … The U.S. … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …

… for growth yet essential for survival, may now be easier to characterize following a proof-of-concept study in which researchers paired CRISPR and … payloads directly into diverse microbes. Combining CRAGE with CRISPR provides researchers with a powerful addition to …

… get any sunlight, and yet they still support a unique array of microorganisms adapted to living in extreme conditions. … seeps through cracks in the Earth’s crust and reacts with very hot rocks below, becoming an extremely hot, … at Lawrence Berkeley National Laboratory, contributed metagenomic sequencing to the study as well as  genome analysis, …

… a microbial mat. The Science In microbial mats, communities of microorganisms live among viruses that infect them. But … inside the host’s genome, living quietly and replicating with their host indefinitely. Now, in studying a microbial … a more systematic picture through single-cell and metagenomic sequencing. A team co-led by Mária Džunková, …

… these hosts are microbes like bacteria, not humans. With metagenomic sequencing, researchers have found more of these viruses than ever before, in all kinds of …

… [subhed -- copy to summary above^ as well ] The Science The recipe for growing algae as a source of sustainable biofuels seems fairly simple: place these algae in a container with access to sunlight, water and carbon dioxide so they …