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JGI Hosts GPU Hackathon in May
May 6-10, 2019 WHERE: JGI With DOE investments in graphical processing unit (GPU)-based high-performance computing … (OLCF), NVIDIA, and the Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user …
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
For many scientists, the culmination of their work into a written … determination. Rhondene Wint, an alumna of the DOE Joint Genome Institute (JGI)-UC Merced internship program and … Adaptive Evolution . Mol Biol Evol. 2022 Feb 3;39(2):msab372.doi: 10.1093/molbev/msab372.   Byline: Ashleigh Papp …
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Gene Expression: From On-Off Switch to Dial
Fine-tuning metabolic gene expression helps identify variants in yeast genes. … researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is …
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Alabama A&M Interns Access An Abundance of Knowledge
In 2024, the DOE Joint Genome Institute and Alabama A&M University piloted an … internship program to bring students to the JGI for research training experience. Enabled by the DOE RENEW initiative, undergraduate …
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Exploring Possibilities: 2022 JGI-UC Merced Interns
In this short video, UC Merced undergraduate and graduate students share how their summer internship experiences have influenced their careers in science. Hear more …
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New Vision, New Mission, New Plan: The JGI’s Next Five Years
New 5-year strategic plan outlines how the JGI will advance the bioeconomy, … community. The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) has released its newest 5-Year … the bioeconomy. Functional diversity theme. Reading the genomes of individual organisms or environmental DNA, and …
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Kjiersten Fagnan
Kjiersten Fagnan began working with JGI in 2012 as a NERSC bioinformatics computing consultant, after completing a … Computing, Networking, Storage and Analysis, 2018, pp. 717-730, doi: 10.1109/SC.2018.00060. Wood-Charlson, E.M., …
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Scaling Up Existing Skill Sets
Year: 3rd year undergraduate student Mentor: Zhong Wang, Genome Analysis What effect has your summer internship with … Merced in Spring 2019.) Mentor: Ben Cole, Genomics of Plant-Microbial Interactions What effect has your summer … intern for a second time since participating in summer 2017 ( read more here on her previous experience) has further …
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JGI Workshops at PAG
Jan. 12 workshop: The Rapidly Expanding Genomics of Algae   With advances in genomics technologies, keen … breadth of algal diversity, the numbers of sequenced algal genomes, and the quality of those genomes, is rising. The purpose of this Workshop is to …
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MycoCosm Tutorial
Learn more about MycoCosm, a data portal with over 2,000 fungal genomes and multi-omics datasets, equipped with interactive …
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Filling in the Plant Tree of Life
… if we understood plants and how they adapt to their ever-changing environments better? We could unlock new innovations to drive more productive food, medicine, and bioenergy crops. But most available genomes are from narrow swaths of the plant tree of life. …
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IMG/VR
JGI's Simon Roux describes the structure and content of the IMG/VR v3 database … the latest release of IMG database dedicated to viral genomes assembled from metagenomes. He also demonstrates briefly how to leverage novel …
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