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Petra Byl
… gyres. She uses genomic and transcriptomic sequencing along with laboratory manipulations to understand how nutrient stress impacts virus-host interaction. …
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Neha Varghese
… bioinformatics software to enable analysis and interpretation of genomic and metagenomic data for JGI’s user community. … support for user science and projects through implementation of advanced analysis pipelines and tools as well as development and implementation of microservices in conjunction with the IMG platform. …
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Kjiersten Fagnan
… with JGI in 2012 as a NERSC bioinformatics computing consultant, after completing a petascale postdoctoral fellowship at NERSC and LBNL’s Computational Research Division.. As a postdoc, her research focused on stable and …
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Enlarging Windows into Understanding Gene Functions
JGI innovates protocol revealing how genetic variations in sequences affect traits. In a text file, the rows of … G appearing over and over in a dizzying array of combinations, are unremarkable, save perhaps for the absence of all … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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Tina Clarke
… joined the Lab in 2007 as the Sr. Human Resources Division Partner for the Joint BioEnergy Institute (JBEI) and in … (JGI). Tina serves in an HR advisory role to Division/Area management and supervisors to recommend solutions and appropriate actions on diverse HR related matters. …
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JGI Earth Month: The Unusual Metabolism That Helps Plants Withstand Drought
In April 2020, we mark both the 50th celebration of Earth Day on April 22, and DNA Day on April 25. As both Earth and DNA … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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Evolution of a Fungal Gene Expression Regulator
… analysis to date of the modified DNA base 5mC variations in fungi. The Science Changing an A, C, T or G in a … technologies for producing both reference genomes and epigenomics, researchers are unwrapping complex mechanisms of … Advanced Computing Resource Center (GACRC) and Georgia Genomics and Bioinformatics Core (GGBC) at the University of …
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Tracing the Evolution of Shiitake Mushrooms
… genus Lentinula, which have evolved to decompose hardwoods on every continent besides Europe and Antarctica. A  new analysis … diversity between cultivated and wild shiitake populations. The Impact Lentinula mushrooms are white rot fungi, …
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
For many scientists, the culmination of their work into a written report that is published in … research, written skill, above all else, determination. Rhondene Wint, an alumna of the DOE Joint Genome Institute …
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Computationally Classifying Fungal Lifestyles
Machine learning methods were applied on sequenced fungal genomes to classify gene families. The Science As a proof of concept, researchers developed an algorithm that “taught” a … food crops and feedstocks for biomass and biofuel production. Learning about the ecology and evolution of  …
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Eelgrass Proves to Be Much Younger Than We Thought
Recent study shows eelgrass has been around about 2.5 million years less than previously believed.  The Science Eelgrass, one of the most abundant plants in the ocean, originated in … Program (CSP 502951, 2016, Population and evolutionary genomics of host–microbiome interactions in Zostera marina …
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Green Algae Reveal One mRNA Encodes Many Proteins
Gene expression in eukaryotes was long held to be monocistronic – that is, a single gene makes … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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