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Transcriptional response of the white-rot fungus Dichomitus squalens to polysaccharides reveals a co-expression network of plant biomass conversion related genes
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Webinar: SIP technologies at EMSL and JGI
… Molecular Sciences Laboratory (EMSL) and the Joint Genome Institute (JGI) provide access to a variety of … Rex Malmstrom provided background on the various isotope-related technologies available at JGI and EMSL such as … in a specific metabolite. If you could do some sort of targeted approach and you needed a lot of quantification, …
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Biology of Fungi and Their Bacterial Endosymbionts
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Biotechnological Innovations through Fungi
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Lignin deconstruction by anaerobic fungi
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New and Improved: Eucalyptus Reference is Now Accessible
… An improved genome assembly to support targeted tree breeding for the bioeconomy.   The Science … genome for eucalyptus in the July edition of the journal G3 Genes | Genomes | Genetics , with significant advances … using advanced technologies to reconstruct the complete sequences of individual chromosomes. The team describes the …
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Leo Baumgart
… Dr. Baumgart joined the DOE Joint Genome Institute in 2018, following his … wide range of JGI user science projects spanning bacteria, fungi, and plants. His team is also developing single-nuclei sequencing methods to characterize gene regulation at the level of individual cells across …
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Tanja Woyke Awarded van Niel International Prize for Studies in Bacterial Systematics
… to Tanja Woyke, who has been awarded the van Niel International Prize for Studies in Bacterial Systematics for the triennium 2017-2020! Established by the University of Queensland in 1986, the van Niel Prize recognizes contribution of …
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From Berkeley to Binghamton: Tracking Strawberry Evolution
… how crops and model organisms may evolve.  Determining the genetic codes of plants is often challenging because in many … and the  oilseed crop false flax – genomes that have been sequenced by the JGI – and the common strawberry, which is … These days, Session is starting his lab at Binghamton “studying polyploids and transposon evolution, expanding on …
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Characterizing Communities: JGI Announces Latest CSP Portfolio
… Proposals aim to sequence and annotate genomes from Antarctica to Africa to … calls. Nearly 200 Terabases of data are expected to be generated for the accepted proposals, said Susannah Tringe, … call. Richard Dick of The Ohio State University aims to study plant drought resilience in the Sahel, an arid region …
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gRNA-SeqRET: a universal tool for targeted and genome-scale gRNA design and sequence extraction for prokaryotes and eukaryotes
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Uncovering Sequence and Structural Characteristics of Fungal Expansin‐Related Proteins With Potential to Drive Substrate Targeting
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