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An Enzyme System to Help Catalyze Bioproduction of Plastic
… By characterizing the structure and function of a methylthio-alkane reductase system, researchers could … of the sulfur they need to grow and divide. Similar to the bacterial enzymes that fix nitrogen — nitrogenases — other … isolate it. The JGI provided a range of constructs based on sequences for MAR enzymes from different organisms to …
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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
… a microbial mat. The Science In microbial mats, communities of microorganisms live among viruses that infect them. But … National Laboratory, used single-cell sequencing to sequence both a cell’s genome and detect accompanying viral … sample — a small proportion of the sample’s billions of bacterial and archaeal cells — and detected the virus in 34 …
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The Case for Conservation
… with a complex genome . Now, high-quality reference genome sequences of the male and female plants, each representing a single … comes from finally having an answer to the question, “Why bother keeping this?” For Stuart McDaniel’s lab at the … Cross-Disciplinary Training Grant, Sigma-Xi Grant-In-Aid of Research, and Society for the Study of Evolution Rosemary …
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Improving the Cacao Genome and Phytozome
… to climate change and devastating fungal infections. That’s why Mars, Inc., a maker of chocolate for more than 100 years and one of the world’s … through the Cacao Genome Database project. The genome sequence was assembled by the plant team at the  HudsonAlpha …
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Specialized proteomic responses and an ancient photoprotection mechanism sustain marine green algal growth during phosphate limitation
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In depth metagenomic analysis in contrasting oil wells reveals syntrophic bacterial and archaeal associations for oil biodegradation in petroleum reservoirs
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IMG-ABC: new features for bacterial secondary metabolism analysis and targeted biosynthetic gene cluster discovery in thousands of microbial genomes
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Sequencing and Analysis of the Entire Genome of the Mycoparasitic Bioeffector Fungus Trichoderma asperelloides Strain T 203 (Hypocreales)
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JGI Scientists Pen Genome Watch Articles
… more to come in 2020. Researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office … Institute in the UK — a nonprofit that was founded to help sequence the human genome. Today, the Sanger Institute … hot topics in genomics.” And it makes sense to Woyke why JGI would have this role. “We work with leaders in …
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Metagenomes and Metatranscriptomes of a Glucose-Amended Agricultural Soil
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RegTransBase – a database of regulatory sequences and interactions based on literature: a resource for investigating transcriptional regulation in prokaryotes
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BiG-SCAPE 2.0 and BiG-SLiCE 2.0: scalable, accurate and interactive sequence clustering of metabolic gene clusters
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