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… JGI’s  PhycoCosm data portal , an interactive collection of sequenced algal genomes, omics data and comparative … on, there are 7 genomes on NCBI but your portal has only 2 of them. A: Watch the video (above) for the answer provided … would it be possible to add a feature to look for synteny of the target genome with itself, to identify regions that …

… Joint Genome Institute (JGI) provide access to a variety of tools that leverage stable isotopes to measure carbon and … 1. Q(uestion): How much DNA is required for the JGI SIP metagenomics pipeline? A(nswer):  The more the better. We want to put at least a microgram of DNA in the tube so you’d need at least 2 micrograms in …

… through the plant portal  Phytozome . Now the portal offers a way for users to more easily access public data sets through a common set of metadata. For Steve Wilson, JGI’s Systems Engineering … ). “We have made a concerted effort to create a common set of ‘baseline metadata’ across the files that are submitted …

… For the Joint Genome Institute, the end of 2018 was marked by a celebration of contributing over one “petabase” – a quadrillion nucleotide bases of DNA sequence to the public data repositories over its now …

… fungal infections. That’s why Mars, Inc., a maker of chocolate for more than 100 years and one of the world’s largest buyers of cocoa, is collaborating with others to develop healthier … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …

… in their chosen field or fields through the publication of multiple highly cited papers during the last decade” by … Tanja Woyke (Biology and Biochemistry)  Here’s a selection of studies these busy bees contributed to:  Giant bacteria … He and  Tringe were also involved in a study that applied metagenomic capabilities to  studying phytoplankton …

… The JGI and EMSL are U.S. Department of Energy (DOE) Office of Science national scientific user facilities dedicated to … Click to view a downloadable copy of the sponsor prospectus … Keynote Speakers Jim Collins Massachusetts Institute of Technology Kristala Prather Massachusetts Institute of …

… Before joining the JGI, he has been working on the boundary of life science and computational science with notable stops at NERSC, IMBA (Institute of Molecular Biotechnology, Vienna) and the High Field MRI Centre in Vienna, where he first stumbled from software development into building productive infrastructure …

… Before 2006, Olpidium was one of the many obscure fungi of Chytridiomycota (the … A collaborative team led by Joey Spatafora at Oregon State University, Jason Stajich at the University of California, … data were generated, bioinformatic tools for binning metagenome data involved with mainly eukaryotic origins were …

… FY2024 EMSL-JGI FICUS collaborative proposal call . Letters of Intent for the joint call are due March 7, 2024. The FICUS call allows researchers to combine the power of genomics and molecular characterization from the JGI and … Source Capabilities for FICUS Program” Sabeeha Merchant , University of California, Berkeley: “Cu economy and luxury …

… crassa . The Science A team led by researchers at the University of California, Berkeley used a multi-omics approach to … fungus  N. crassa , a team led by N. Louise Glass at the University of California, Berkeley and her postdoctoral … We acknowledge the use of deletion strains generated by Grant P01 GM-068087 …

… three new members earlier this month – Sneha Couvilion of Pacific Northwest National Laboratory, Chris Schadt of … National Laboratory and Elizabeth “Lizzy” Wilbanks of the University of California, Santa Barbara. They join eight … and the JGI-EMSL FICUS programs and brings expertise in metagenomics and novel applications for long-read DNA …