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From Competition to Cooperation
… associations allow host plants, such as candidate  bioenergy feedstock crops, to acquire nutrients. … of Forest Soil Ecosystems project (CSP # 570) and the 1000 Fungal Genome projects (CSP # 662 & 1974). This …
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JGI on the 2020 Highly Cited Researchers List
… to help researchers assess and improve the quality of metagenome-assembled viral genomes. The paper appeared in  … a JGI-led team that  applied machine learning to classify 101 representative genomes of Dothideomycetes, the largest … and benefit from breeding programs of related candidate bioenergy feedstock crops such as sugarcane and sorghum.     …
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Gene Expression: From On-Off Switch to Dial
… available for other JGI users outside the realm of bioenergy optimization. Summary Life is all about balance. …
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Polar Phytoplankton Need Zinc to Cope with the Cold
… latitudes from pole to pole, using metatranscriptome and metagenome data from the JGI. With multiple threads of … diversity and biology to support basic science as well as bioenergy and biomanufacturing. The JGI Algal Program makes …
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Evolution of a Fungal Gene Expression Regulator
… and fungi run the gamut from mutually beneficial to antagonistic. In fungi, 5mC is often found in transposable … ways to protect poplar and other crops being considered for bioenergy feedstock development. Summary With the aim of … least one reference genome for every family of fungi, the 1000 Fungal Genomes initiative of the U.S. Department of …
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Water mass age structures the auxiliary metabolic gene content of free-living and particle-attached deep ocean viral communities
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Genome Sequence of Arenibacter algicola Strain TG409, a Hydrocarbon-Degrading Bacterium Associated with Marine Eukaryotic Phytoplankton
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A Collaboration to Improve Plant Genome Annotations Across Species
Avinash: In the initial planning phase, there were about 10 groups that came together to standardize the experimental …
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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
… complex plants that could be applied toward DOE-relevant bioenergy and environmental interests.  Summary As the … history.  … The work (proposal: award at  https://doi.org/10.46936/10.25585/60001405 ) conducted by the US Department of Energy …
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New Research Sheds Light on Diversity in the Deep Sea
… near hydrothermal deep-sea vents hold vast potential for bioenergy.   The Science Hydrothermal vents are ocean-floor … at Lawrence Berkeley National Laboratory, contributed metagenomic sequencing to the study as well as  genome …
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JGI@25: Mapping Switchgrass Traits with Common Gardens
… tolerance, and other traits that make it a viable candidate bioenergy feedstock crop. In 2018, the JGI had sequenced and … switchgrass gardens to track crop productivity across 1,100 miles and eight states. In 2021, using switchgrass …
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Triggering Morel Fruiting
… from an external source.  The work is part of the JGI’s 1000 Fungal Genomes Project, which aims to provide genomic …
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