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Metagenome-assembled archaeal genomes provide new insights into an ancient metabolism. Methane is a greenhouse … of methanogenesis and the presence of methanogens in nearly all types of anaerobic environments suggest the … the oldest metabolisms, with the first traces possibly at ~3.5 Gy (billion years),” Borrel and Gribaldo said in an …

Collaboratory encourages user engagement. The Science In addition to the core set of "primary … public database for the research community. With more than 13 million BGCs in the catalog at the time of publication, it is the largest repository of BGC sequence …

In the summer of 2015, Adam Session was a postdoc working at … a Nature Communications paper that builds off their early collaborations that could help crop breeders and … possible candidate ancestors are available. Our method clearly identifies the four subgenomes based on non-genic …

In honor of the JGI's 25th anniversary in 2022, we have … common bean’s nutritional value, providing anywhere from 10-30% of daily protein requirements. It is also an essential … bean, identifying genes related to disease-resistance, flowering time, nitrogen metabolism, seed weight and …

Harnessing BER-funded data resources, researchers built an … researchers recently compiled a list of with more than 8,300 organisms from multiple sources, including the U.S. … phenotype and genotype of fermentative prokaryotes on IMG … Publication … Datasets … Datasets … Datasets …

Tanja Woyke and other JGI researchers made their debut writing for the Nature Reviews Microbiology column last year — and there’s more to come in 2020. Researchers at the U.S. Department of Energy (DOE) … professional development. “There are a lot of really great early career people here at JGI who could take advantage of …

Congratulations to US Department of Energy (DOE) Joint Genome Institute (JGI) staff scientist Simon Roux , who … those selected by the DOE Office of Science as part of the Early Career Research Program (ECRP). His project, … function. He was one of the eight JGI researchers on the 2023 Highly Cited Researchers list, and has appeared on the …

Analysis reveals the microbial community involved in a bioremediation effort. The Science In 1999, … parts of the shallow portions of the groundwater were nearly cleared of contamination. By 2020, the water was at … understand the ERD process.  … The work (proposal:  10.46936/10.25585/60000717 ) conducted by the U.S. Department of …

… growth, provide critical advantages to the organisms producing them, and are often involved in defense, nutrient acquisition and communication. Studying …

… change with the seasons. The Science Light-harvesting bacteria (phototrophs) in Antarctica’s Ace Lake defy the … ago and has been well-studied by many researchers for nearly five decades. In these frigid systems, where organisms … found that the green sulfur bacteria population spiked to 83%, only to dramatically fall to 1% in early spring and …

To expand access to integrated data, improve tools and infrastructure as well as ensure cohesive data standards, … (ESNet), the JGI has unique access to both expertise and infrastructure to facilitate these efforts. Particular areas …

… are small viruses with double-stranded DNA genomes that co-infect eukaryotic cells along with giant viruses. Virophages … sequences.  Further analysis led to the identification of 328 “high quality” (based on completeness) diverse new … of virophages.” Lead author David Paez-Espino  discussed an early version of the paper at the 2018 Viral EcoGenomics & …