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Capturing the genetic makeup of the active microbiome in situ
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ChIP-seq accurately predicts tissue-specific activity of enhancers
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Seasonal activities of the phyllosphere microbiome of perennial crops
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2024 Progress Report
… (KBase), the National Microbiome Data Collaborative (NMDC), and Berkeley Lab Biosciences Area are also co-located in the IGB. Vision  Lead genomic innovation for a sustainable bioeconomy. Mission  As a U.S. Department of Energy Office of Science user facility, we provide …
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Improving Microbial Genome Annotations in an Integrated Database Context
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GenePRIMP: a gene prediction improvement pipeline for prokaryotic genomes
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Improving genome assemblies by sequencing PCR products with PacBio
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JGI Contributes Nine to 2022 Highly Cited Researchers List
… the  2022 Highly Cited Researchers from the JGI recognized for their “significant influence in their chosen field or fields through the publication of multiple highly cited papers during the last … Lawrence Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean …
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Pinning Down a Piece of Photosynthesis
… By studying the structure and function of a cyanobacterial protein, researchers have new insights … and cyanobacteria create the air we breathe and the fuel for food webs as they turn carbon dioxide and water into … Lawrence Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean …
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Taking Stock of the Known and Unknown Microbial Space
… microbial diversity hotspots Over the past few decades, advancements in sequencing technologies have led to an abundance of microbial genomes becoming available to the global … the microbial diversity we know about, and proposes a path forward to curate and cultivate what is still unknown.  “We …
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … challenges, characterizing viruses is a key step. For decades, though, many viruses have been somewhat … engineer microbial genes. Eventually, whether the goal is improving soil microbiomes for carbon capture or removing …
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Metabolomics
… at the JGI by identifying the actual molecules present in an environment that influence system behavior.  Through this … of new molecules and pathways. The JGI Metabolomics Platform delivers rich metabolite profiles from diverse … liquid chromatography mass spectrometry (LC-MS) based methods in combination with advanced computational analysis. …
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